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HUMAN:CSTFT
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | CSTF2T (synonyms: KIAA0689) | |
| Protein Name(s) | Cleavage stimulation factor subunit 2 tau variant
CF-1 64 kDa subunit tau variant Cleavage stimulation factor 64 kDa subunit tau variant CSTF 64 kDa subunit tau variant TauCstF-64 | |
| External Links | ||
| UniProt | Q9H0L4 | |
| EMBL | AY130299 AL136747 AK222574 AK314318 CH471083 BC028239 AB014589 | |
| CCDS | CCDS7245.1 | |
| RefSeq | NP_056050.1 | |
| UniGene | Hs.591358 | |
| ProteinModelPortal | Q9H0L4 | |
| SMR | Q9H0L4 | |
| BioGrid | 116881 | |
| IntAct | Q9H0L4 | |
| MINT | MINT-1461400 | |
| STRING | 9606.ENSP00000332444 | |
| PhosphoSite | Q9H0L4 | |
| DMDM | 71153234 | |
| REPRODUCTION-2DPAGE | IPI00550906 | |
| MaxQB | Q9H0L4 | |
| PaxDb | Q9H0L4 | |
| PeptideAtlas | Q9H0L4 | |
| PRIDE | Q9H0L4 | |
| DNASU | 23283 | |
| Ensembl | ENST00000331173 | |
| GeneID | 23283 | |
| KEGG | hsa:23283 | |
| UCSC | uc001jjp.3 | |
| CTD | 23283 | |
| GeneCards | GC10M053455 | |
| HGNC | HGNC:17086 | |
| HPA | HPA039216 | |
| MIM | 611968 | |
| neXtProt | NX_Q9H0L4 | |
| PharmGKB | PA134933809 | |
| eggNOG | COG0724 | |
| GeneTree | ENSGT00760000119351 | |
| HOGENOM | HOG000214373 | |
| HOVERGEN | HBG051145 | |
| InParanoid | Q9H0L4 | |
| KO | K14407 | |
| OMA | LPMDGRG | |
| OrthoDB | EOG7N63NZ | |
| PhylomeDB | Q9H0L4 | |
| TreeFam | TF314948 | |
| GeneWiki | CSTF2T | |
| GenomeRNAi | 23283 | |
| NextBio | 45080 | |
| PRO | PR:Q9H0L4 | |
| Proteomes | UP000005640 | |
| Bgee | Q9H0L4 | |
| CleanEx | HS_CSTF2T | |
| Genevestigator | Q9H0L4 | |
| GO | GO:0005622 GO:0005634 GO:0000166 GO:0044822 GO:0006397 | |
| Gene3D | 3.30.70.330 | |
| InterPro | IPR025742 IPR026896 IPR012677 IPR000504 | |
| Pfam | PF14327 PF14304 PF00076 | |
| SMART | SM00360 | |
| PROSITE | PS50102 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005622 |
intracellular |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0098789 |
pre-mRNA cleavage required for polyadenylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566843 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005847 |
mRNA cleavage and polyadenylation specificity factor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566843 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566843 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1932622 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8C7E9 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031124 |
mRNA 3'-end processing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031124 |
mRNA 3'-end processing |
Reactome:R-HSA-75067 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0006369 |
termination of RNA polymerase II transcription |
Reactome:R-HSA-109688 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-8849157 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
Reactome:R-HSA-72163 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Castello, A et al. (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149 1393-406 PubMed GONUTS page
- ↑ Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
