GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

HUMAN:BRD4

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) BRD4 (synonyms: HUNK1)
Protein Name(s) Bromodomain-containing protein 4

Protein HUNK1

External Links
UniProt O60885
EMBL AF386649
Y12059
AC004798
AC003111
AC005776
CH471106
BC035266
AY166680
CCDS CCDS12328.1
CCDS46004.1
RefSeq NP_055114.1
NP_490597.1
UniGene Hs.187763
PDB 2I8N
2LSP
2MJV
2NNU
2OSS
2OUO
2YEL
2YEM
3MXF
3P5O
3SVF
3SVG
3U5J
3U5K
3U5L
3UVW
3UVX
3UVY
3UW9
3ZYU
4A9L
4BJX
4BW1
4BW2
4BW3
4BW4
4C66
4C67
4CFK
4CFL
4DON
4E96
4F3I
4GPJ
4HBV
4HBW
4HBX
4HBY
4HXK
4HXL
4HXM
4HXN
4HXO
4HXP
4HXR
4HXS
4IOO
4IOQ
4IOR
4J0R
4J0S
4J3I
4KV1
4KV4
4LR6
4LRG
4LYI
4LYS
4LYW
4LZR
4LZS
4MEN
4MEO
4MEP
4MEQ
4MR3
4MR4
4NQM
4NR8
4NUC
4NUD
4NUE
4O70
4O71
4O72
4O74
4O75
4O76
4O77
4O78
4O7A
4O7B
4O7C
4O7E
4O7F
4OGI
4OGJ
4PCE
4PCI
4PS5
4QZS
4UYD
4WIV
PDBsum 2I8N
2LSP
2MJV
2NNU
2OSS
2OUO
2YEL
2YEM
3MXF
3P5O
3SVF
3SVG
3U5J
3U5K
3U5L
3UVW
3UVX
3UVY
3UW9
3ZYU
4A9L
4BJX
4BW1
4BW2
4BW3
4BW4
4C66
4C67
4CFK
4CFL
4DON
4E96
4F3I
4GPJ
4HBV
4HBW
4HBX
4HBY
4HXK
4HXL
4HXM
4HXN
4HXO
4HXP
4HXR
4HXS
4IOO
4IOQ
4IOR
4J0R
4J0S
4J3I
4KV1
4KV4
4LR6
4LRG
4LYI
4LYS
4LYW
4LZR
4LZS
4MEN
4MEO
4MEP
4MEQ
4MR3
4MR4
4NQM
4NR8
4NUC
4NUD
4NUE
4O70
4O71
4O72
4O74
4O75
4O76
4O77
4O78
4O7A
4O7B
4O7C
4O7E
4O7F
4OGI
4OGJ
4PCE
4PCI
4PS5
4QZS
4UYD
4WIV
ProteinModelPortal O60885
SMR O60885
BioGrid 117036
DIP DIP-39776N
IntAct O60885
MINT MINT-1176376
STRING 9606.ENSP00000263377
BindingDB O60885
ChEMBL CHEMBL1163125
GuidetoPHARMACOLOGY 1945
PhosphoSite O60885
MaxQB O60885
PaxDb O60885
PeptideAtlas O60885
PRIDE O60885
Ensembl ENST00000263377
ENST00000360016
ENST00000371835
GeneID 23476
KEGG hsa:23476
UCSC uc002nar.3
uc002nas.3
uc002nat.3
CTD 23476
GeneCards GC19M015348
HGNC HGNC:13575
HPA HPA015055
MIM 608749
neXtProt NX_O60885
PharmGKB PA25416
eggNOG COG5076
GeneTree ENSGT00760000119206
HOGENOM HOG000231200
HOVERGEN HBG004896
InParanoid O60885
KO K11722
OMA FIATQVP
PhylomeDB O60885
TreeFam TF317345
ChiTaRS BRD4
EvolutionaryTrace O60885
GeneWiki BRD4
GenomeRNAi 23476
NextBio 45817
PMAP-CutDB O60885
PRO PR:O60885
Proteomes UP000005640
Bgee O60885
CleanEx HS_BRD4
ExpressionAtlas O60885
Genevestigator O60885
GO GO:0005694
GO:0000794
GO:0005737
GO:0000790
GO:0005634
GO:0008024
GO:0003682
GO:0003677
GO:0070577
GO:0002039
GO:0006974
GO:0006338
GO:0007059
GO:0044154
GO:0043983
GO:0001833
GO:2000002
GO:0043388
GO:0010971
GO:0043123
GO:0032968
GO:0045944
GO:0006468
GO:0050727
GO:1901407
GO:0000083
GO:0006351
GO:0016032
Gene3D 1.20.920.10
InterPro IPR001487
IPR018359
IPR027353
Pfam PF00439
PRINTS PR00503
SMART SM00297
SUPFAM SSF47370
PROSITE PS00633
PS50014
PS51525

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0008284

positive regulation of transcription during mitosis

PMID:24403256[1]

ECO:0000314

P

Figure 1. BRD4 promotes proliferation in acute myeloid leukaemia cells.

complete
CACAO 9287

involved_in

GO:2001255

positive regulation of histone H3-K36 trimethylation

PMID:21555454[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0106140

P-TEFb complex binding

PMID:24360279[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:21555454[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q6NYC1

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:21555454[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9BZ95

F

Seeded From UniProt

complete

enables

GO:0001134

transcription regulator recruiting activity

PMID:24360279[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070577

lysine-acetylated histone binding

PMID:29176719[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:24360279[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:21555454[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

has_regulation_target:(UniProtKB:Q9P1W9)|has_regulation_target:(UniProtKB:P24385)|has_regulation_target:(UniProtKB:Q96C86)

Seeded From UniProt

complete

involved_in

GO:1901407

regulation of phosphorylation of RNA polymerase II C-terminal domain

PMID:23086925[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0070577

lysine-acetylated histone binding

PMID:23086925[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070577

lysine-acetylated histone binding

PMID:23317504[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070577

lysine-acetylated histone binding

PMID:20871596[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0050727

regulation of inflammatory response

PMID:19103749[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:23086925[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:23317504[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043123

positive regulation of I-kappaB kinase/NF-kappaB signaling

PMID:19103749[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032968

positive regulation of transcription elongation from RNA polymerase II promoter

PMID:19103749[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032968

positive regulation of transcription elongation from RNA polymerase II promoter

PMID:23086925[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20871596[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:23086925[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:23317504[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:20871596[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0002039

p53 binding

PMID:23317504[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0099122

RNA polymerase II C-terminal domain binding

PMID:22509028[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0032968

positive regulation of transcription elongation from RNA polymerase II promoter

PMID:18039861[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010971

positive regulation of G2/M transition of mitotic cell cycle

PMID:10938129[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008353

RNA polymerase II CTD heptapeptide repeat kinase activity

PMID:22509028[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000794

condensed nuclear chromosome

PMID:10938129[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0000083

regulation of transcription involved in G1/S transition of mitotic cell cycle

PMID:18039861[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008353

P

Seeded From UniProt

complete

involved_in

GO:2000002

negative regulation of DNA damage checkpoint

PMID:23728299[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0070577

lysine-acetylated histone binding

PMID:23728299[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

PMID:23728299[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006338

chromatin remodeling

PMID:23728299[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

PMID:23728299[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:23728299[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

involved_in

GO:0016032

viral process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0945

P

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Stewart, HJ et al. (2013) BRD4 associates with p53 in DNMT3A-mutated leukemia cells and is implicated in apoptosis by the bromodomain inhibitor JQ1. Cancer Med 2 826-35 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Rahman, S et al. (2011) The Brd4 extraterminal domain confers transcription activation independent of pTEFb by recruiting multiple proteins, including NSD3. Mol. Cell. Biol. 31 2641-52 PubMed GONUTS page
  3. 3.0 3.1 3.2 Liu, W et al. (2013) Brd4 and JMJD6-associated anti-pause enhancers in regulation of transcriptional pause release. Cell 155 1581-95 PubMed GONUTS page
  4. Konuma, T et al. (2017) Structural Mechanism of the Oxygenase JMJD6 Recognition by the Extraterminal (ET) Domain of BRD4. Sci Rep 7 16272 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 Zhang, W et al. (2012) Bromodomain-containing protein 4 (BRD4) regulates RNA polymerase II serine 2 phosphorylation in human CD4+ T cells. J. Biol. Chem. 287 43137-55 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Wu, SY et al. (2013) Phospho switch triggers Brd4 chromatin binding and activator recruitment for gene-specific targeting. Mol. Cell 49 843-57 PubMed GONUTS page
  7. 7.0 7.1 7.2 Filippakopoulos, P et al. (2010) Selective inhibition of BET bromodomains. Nature 468 1067-73 PubMed GONUTS page
  8. 8.0 8.1 8.2 Huang, B et al. (2009) Brd4 coactivates transcriptional activation of NF-kappaB via specific binding to acetylated RelA. Mol. Cell. Biol. 29 1375-87 PubMed GONUTS page
  9. 9.0 9.1 Devaiah, BN et al. (2012) BRD4 is an atypical kinase that phosphorylates serine2 of the RNA polymerase II carboxy-terminal domain. Proc. Natl. Acad. Sci. U.S.A. 109 6927-32 PubMed GONUTS page
  10. 10.0 10.1 Yang, Z et al. (2008) Brd4 recruits P-TEFb to chromosomes at late mitosis to promote G1 gene expression and cell cycle progression. Mol. Cell. Biol. 28 967-76 PubMed GONUTS page
  11. 11.0 11.1 Dey, A et al. (2000) A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition. Mol. Cell. Biol. 20 6537-49 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 12.4 12.5 Floyd, SR et al. (2013) The bromodomain protein Brd4 insulates chromatin from DNA damage signalling. Nature 498 246-50 PubMed GONUTS page