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HALSA:IDI2
Contents
Species (Taxon ID) | Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)(Halobacterium halobium). (64091) | |
Gene Name(s) | fni4 (ECO:0000255 with HAMAP-Rule:MF_00354) (synonyms: fni1) | |
Protein Name(s) | Isopentenyl-diphosphate delta-isomerase (ECO:0000255 with HAMAP-Rule:MF_00354)
IPP isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Isopentenyl pyrophosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Type 2 isopentenyl diphosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) IDI-2 (ECO:0000255 with HAMAP-Rule:MF_00354) | |
External Links | ||
UniProt | Q9HHE4 | |
EMBL | AF016485 AF016485 AE004438 AE004438 | |
RefSeq | NP_046005.1 NP_046094.1 NP_395633.1 NP_395905.1 | |
ProteinModelPortal | Q9HHE4 | |
STRING | 64091.VNG7149 | |
PaxDb | Q9HHE4 | |
EnsemblBacteria | AAC82844 AAC82933 AAG20768 AAG21040 | |
GeneID | 1446842 1446923 1449237 1449415 | |
KEGG | hal:VNG6081G hal:VNG6445G hal:VNG7060 hal:VNG7149 | |
eggNOG | COG1304 | |
InParanoid | Q9HHE4 | |
KO | K01823 | |
PhylomeDB | Q9HHE4 | |
Proteomes | UP000000554 UP000000554 | |
GO | GO:0005737 GO:0010181 GO:0004452 GO:0046872 GO:0016491 GO:0008299 | |
Gene3D | 3.20.20.70 | |
HAMAP | MF_00354 | |
InterPro | IPR013785 IPR000262 IPR011179 | |
PANTHER | PTHR10578:SF3 | |
Pfam | PF01070 | |
PIRSF | PIRSF003314 | |
TIGRFAMs | TIGR02151 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0004452 |
isopentenyl-diphosphate delta-isomerase activity |
ECO:0000314 |
F |
Figure 1a shows that with the absence of NaCl DMAPP does not form. Figure 2a shows that in the presence of NaCl DMAPP does in fact occur in this species. |
complete | |||||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016491 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004452 |
isopentenyl-diphosphate delta-isomerase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0010181 |
FMN binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004452 |
isopentenyl-diphosphate delta-isomerase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0070402 |
NADPH binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0010181 |
FMN binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000287 |
magnesium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004452 |
isopentenyl-diphosphate delta-isomerase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000036463 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008299 |
isoprenoid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Hoshino, T & Eguchi, T (2007) Functional analysis of type 1 isopentenyl diphosphate isomerase from Halobacterium sp. NRC-1. Biosci. Biotechnol. Biochem. 71 2588-91 PubMed GONUTS page