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HALSA:IDI2

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Species (Taxon ID) Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)(Halobacterium halobium). (64091)
Gene Name(s) fni4 (ECO:0000255 with HAMAP-Rule:MF_00354) (synonyms: fni1)
Protein Name(s) Isopentenyl-diphosphate delta-isomerase (ECO:0000255 with HAMAP-Rule:MF_00354)

IPP isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Isopentenyl pyrophosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) Type 2 isopentenyl diphosphate isomerase (ECO:0000255 with HAMAP-Rule:MF_00354) IDI-2 (ECO:0000255 with HAMAP-Rule:MF_00354)

External Links
UniProt Q9HHE4
EMBL AF016485
AF016485
AE004438
AE004438
RefSeq NP_046005.1
NP_046094.1
NP_395633.1
NP_395905.1
ProteinModelPortal Q9HHE4
STRING 64091.VNG7149
PaxDb Q9HHE4
EnsemblBacteria AAC82844
AAC82933
AAG20768
AAG21040
GeneID 1446842
1446923
1449237
1449415
KEGG hal:VNG6081G
hal:VNG6445G
hal:VNG7060
hal:VNG7149
eggNOG COG1304
InParanoid Q9HHE4
KO K01823
PhylomeDB Q9HHE4
Proteomes UP000000554
UP000000554
GO GO:0005737
GO:0010181
GO:0004452
GO:0046872
GO:0016491
GO:0008299
Gene3D 3.20.20.70
HAMAP MF_00354
InterPro IPR013785
IPR000262
IPR011179
PANTHER PTHR10578:SF3
Pfam PF01070
PIRSF PIRSF003314
TIGRFAMs TIGR02151

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0004452

isopentenyl-diphosphate delta-isomerase activity

PMID:17928693[1]

ECO:0000314

F

Figure 1a shows that with the absence of NaCl DMAPP does not form. Figure 2a shows that in the presence of NaCl DMAPP does in fact occur in this species.

complete
CACAO 4537

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0016491

P

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013785

F

Seeded From UniProt

complete

enables

GO:0004452

isopentenyl-diphosphate delta-isomerase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011179

F

Seeded From UniProt

complete

involved_in

GO:0008299

isoprenoid biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011179

P

Seeded From UniProt

complete

enables

GO:0010181

FMN binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011179

F

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000262

F

Seeded From UniProt

complete

enables

GO:0004452

isopentenyl-diphosphate delta-isomerase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.3.3.2

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

C

Seeded From UniProt

complete

enables

GO:0070402

NADPH binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

F

Seeded From UniProt

complete

enables

GO:0010181

FMN binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

F

Seeded From UniProt

complete

enables

GO:0000287

magnesium ion binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

F

Seeded From UniProt

complete

involved_in

GO:0008299

isoprenoid biosynthetic process

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

P

Seeded From UniProt

complete

enables

GO:0004452

isopentenyl-diphosphate delta-isomerase activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000036463

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

involved_in

GO:0008299

isoprenoid biosynthetic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0414

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Hoshino, T & Eguchi, T (2007) Functional analysis of type 1 isopentenyl diphosphate isomerase from Halobacterium sp. NRC-1. Biosci. Biotechnol. Biochem. 71 2588-91 PubMed GONUTS page