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ECOLI:UVRB
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | uvrB | |
Protein Name(s) | UvrABC system protein B
Protein UvrB Excinuclease ABC subunit B | |
External Links | ||
UniProt | P0A8F8 | |
EMBL | X03678 X03722 U00096 AP009048 | |
PIR | A93613 | |
RefSeq | NP_415300.1 YP_489052.1 | |
PDB | 1E52 1QOJ | |
PDBsum | 1E52 1QOJ | |
ProteinModelPortal | P0A8F8 | |
SMR | P0A8F8 | |
DIP | DIP-48012N | |
IntAct | P0A8F8 | |
MINT | MINT-1244062 | |
STRING | 511145.b0779 | |
PaxDb | P0A8F8 | |
PRIDE | P0A8F8 | |
EnsemblBacteria | AAC73866 BAA35437 | |
GeneID | 12930963 945385 | |
KEGG | ecj:Y75_p0752 eco:b0779 | |
PATRIC | 32116759 | |
EchoBASE | EB1055 | |
EcoGene | EG11062 | |
eggNOG | COG0556 | |
HOGENOM | HOG000073580 | |
InParanoid | P0A8F8 | |
KO | K03702 | |
OMA | NKTLCAQ | |
OrthoDB | EOG6B360R | |
PhylomeDB | P0A8F8 | |
BioCyc | EcoCyc:EG11062-MONOMER ECOL316407:JW0762-MONOMER MetaCyc:EG11062-MONOMER | |
EvolutionaryTrace | P0A8F8 | |
PRO | PR:P0A8F8 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0A8F8 | |
GO | GO:0005737 GO:0009380 GO:0005524 GO:0003677 GO:0009381 GO:0004386 GO:0006289 GO:0009432 | |
Gene3D | 3.40.50.300 4.10.860.10 | |
HAMAP | MF_00204 | |
InterPro | IPR006935 IPR014001 IPR001650 IPR027417 IPR001943 IPR004807 IPR024759 | |
PANTHER | PTHR24029 | |
Pfam | PF00271 PF04851 PF02151 PF12344 | |
SMART | SM00487 SM00490 | |
SUPFAM | SSF46600 SSF52540 | |
TIGRFAMs | TIGR00631 | |
PROSITE | PS51192 PS51194 PS50151 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0009380 |
excinuclease repair complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009314 |
response to radiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006289 |
nucleotide-excision repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009380 |
excinuclease repair complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016887 |
ATPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0009381 |
excinuclease ABC activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006289 |
nucleotide-excision repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009432 |
SOS response |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000080076 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009432 |
SOS response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Verhoeven, EE et al. (2002) The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands. EMBO J. 21 4196-205 PubMed GONUTS page
- ↑ Rajagopala, SV et al. (2014) The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. 32 285-90 PubMed GONUTS page
- ↑ Sargentini, NJ et al. () Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Mutat. Res. 793-794 1-14 PubMed GONUTS page