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ECOLI:UNG
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ung | |
| Protein Name(s) | Uracil-DNA glycosylase
UDG | |
| External Links | ||
| UniProt | P12295 | |
| EMBL | J03725 D13169 D64044 U00096 AP009048 | |
| PIR | A28175 | |
| RefSeq | NP_417075.1 WP_001262716.1 | |
| PDB | 1EUG 1EUI 1FLZ 1LQG 1LQJ 1LQM 1UUG 2EUG 2UUG 3EUG 3UF7 4EUG 5EUG | |
| PDBsum | 1EUG 1EUI 1FLZ 1LQG 1LQJ 1LQM 1UUG 2EUG 2UUG 3EUG 3UF7 4EUG 5EUG | |
| ProteinModelPortal | P12295 | |
| SMR | P12295 | |
| BioGrid | 4263474 | |
| DIP | DIP-11092N | |
| IntAct | P12295 | |
| MINT | MINT-194643 | |
| STRING | 511145.b2580 | |
| PaxDb | P12295 | |
| PRIDE | P12295 | |
| EnsemblBacteria | AAC75633 BAA16466 | |
| GeneID | 947067 | |
| KEGG | ecj:JW2564 eco:b2580 | |
| PATRIC | 32120561 | |
| EchoBASE | EB1051 | |
| EcoGene | EG11058 | |
| eggNOG | ENOG4105D5S COG0692 | |
| HOGENOM | HOG000229528 | |
| InParanoid | P12295 | |
| KO | K03648 | |
| OMA | IALIPKN | |
| OrthoDB | EOG6MSS63 | |
| PhylomeDB | P12295 | |
| BioCyc | EcoCyc:EG11058-MONOMER ECOL316407:JW2564-MONOMER MetaCyc:EG11058-MONOMER | |
| BRENDA | 3.2.2.27 | |
| SABIO-RK | P12295 | |
| EvolutionaryTrace | P12295 | |
| PRO | PR:P12295 | |
| Proteomes | UP000000318 UP000000625 | |
| GO | GO:0005737 GO:0004844 GO:0006284 | |
| Gene3D | 3.40.470.10 | |
| HAMAP | MF_00148 | |
| InterPro | IPR018085 IPR002043 IPR005122 | |
| PANTHER | PTHR11264 | |
| Pfam | PF03167 | |
| SMART | SM00986 | |
| SUPFAM | SSF52141 | |
| TIGRFAMs | TIGR00628 | |
| PROSITE | PS00130 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0097510 |
base-excision repair, AP site formation via deaminated base removal |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000137400 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109352 |
C |
Seeded From UniProt |
complete | ||
|
NOT|part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000137400 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109352 |
C |
Seeded From UniProt |
complete | ||
|
NOT|part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000137400 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004844 |
uracil DNA N-glycosylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11058 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004844 |
uracil DNA N-glycosylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004844 |
uracil DNA N-glycosylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006284 |
base-excision repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016799 |
hydrolase activity, hydrolyzing N-glycosyl compounds |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000001447 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004844 |
uracil DNA N-glycosylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000001447 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006284 |
base-excision repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000001447 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Lindahl, T et al. (1977) DNA N-glycosidases: properties of uracil-DNA glycosidase from Escherichia coli. J. Biol. Chem. 252 3286-94 PubMed GONUTS page
