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ECOLI:SRP54
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ffh (ECO:0000255 with HAMAP-Rule:MF_00306) | |
| Protein Name(s) | Signal recognition particle protein (ECO:0000255 with HAMAP-Rule:MF_00306)
Fifty-four homolog (ECO:0000255 with HAMAP-Rule:MF_00306) Ffh p48 | |
| External Links | ||
| UniProt | P0AGD7 | |
| EMBL | X01818 U00096 AP009048 | |
| PIR | E65039 | |
| RefSeq | NP_417101.1 YP_490833.1 | |
| PDB | 1DUL 1HQ1 2J28 2PXB 2PXD 2PXE 2PXF 2PXK 2PXL 2PXP 2PXQ 2PXT 2PXU 2PXV 2XKV 2XXA 3LQX 4C7O | |
| PDBsum | 1DUL 1HQ1 2J28 2PXB 2PXD 2PXE 2PXF 2PXK 2PXL 2PXP 2PXQ 2PXT 2PXU 2PXV 2XKV 2XXA 3LQX 4C7O | |
| ProteinModelPortal | P0AGD7 | |
| SMR | P0AGD7 | |
| DIP | DIP-31865N | |
| IntAct | P0AGD7 | |
| MINT | MINT-1218614 | |
| STRING | 511145.b2610 | |
| TCDB | 3.A.5.1.1 | |
| PaxDb | P0AGD7 | |
| PRIDE | P0AGD7 | |
| EnsemblBacteria | AAC75659 BAA16495 | |
| GeneID | 12933092 947102 | |
| KEGG | ecj:Y75_p2558 eco:b2610 | |
| PATRIC | 32120619 | |
| EchoBASE | EB0296 | |
| EcoGene | EG10300 | |
| eggNOG | COG0541 | |
| HOGENOM | HOG000036164 | |
| InParanoid | P0AGD7 | |
| KO | K03106 | |
| OMA | MLPGMGQ | |
| OrthoDB | EOG62K1ZH | |
| PhylomeDB | P0AGD7 | |
| BioCyc | EcoCyc:EG10300-MONOMER ECOL316407:JW5414-MONOMER | |
| EvolutionaryTrace | P0AGD7 | |
| PRO | PR:P0AGD7 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AGD7 | |
| GO | GO:0030529 GO:0048500 GO:0008312 GO:0005525 GO:0003924 GO:0006184 GO:0006612 GO:0006614 | |
| Gene3D | 1.10.260.30 3.40.50.300 | |
| HAMAP | MF_00306 | |
| InterPro | IPR003593 IPR027417 IPR013822 IPR004125 IPR022941 IPR000897 IPR004780 | |
| PANTHER | PTHR11564:SF7 | |
| Pfam | PF00448 PF02881 PF02978 | |
| SMART | SM00382 SM00962 SM00963 | |
| SUPFAM | SSF47446 SSF52540 | |
| TIGRFAMs | TIGR00959 | |
| PROSITE | PS00300 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048500 |
signal recognition particle |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048500 |
signal recognition particle |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006612 |
protein targeting to membrane |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000897 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006614 |
SRP-dependent cotranslational protein targeting to membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000897 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008312 |
7S RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048500 |
signal recognition particle |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR004125 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006612 |
protein targeting to membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0048500 |
signal recognition particle |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083187 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005525 |
GTP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Poritz, MA et al. (1990) An E. coli ribonucleoprotein containing 4.5S RNA resembles mammalian signal recognition particle. Science 250 1111-7 PubMed GONUTS page
- ↑ 2.0 2.1 Phillips, GJ & Silhavy, TJ (1992) The E. coli ffh gene is necessary for viability and efficient protein export. Nature 359 744-6 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Samuelsson, T et al. (1995) The GTPase activity of the Escherichia coli Ffh protein is important for normal growth. Biochim. Biophys. Acta 1267 83-91 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
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