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ECOLI:RRF
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | frr (ECO:0000255 with HAMAP-Rule:MF_00040) (synonyms: rrf) | |
Protein Name(s) | Ribosome-recycling factor (ECO:0000255 with HAMAP-Rule:MF_00040)
RRF (ECO:0000255 with HAMAP-Rule:MF_00040) Ribosome-releasing factor (ECO:0000255 with HAMAP-Rule:MF_00040) | |
External Links | ||
UniProt | P0A805 | |
EMBL | J05113 D13334 U70214 U00096 AP009048 M69029 | |
PIR | A34495 | |
RefSeq | NP_414714.1 YP_488474.1 | |
PDB | 1EK8 1ISE 1ZN0 1ZN1 2RDO 4GAS 4GD1 | |
PDBsum | 1EK8 1ISE 1ZN0 1ZN1 2RDO 4GAS 4GD1 | |
ProteinModelPortal | P0A805 | |
SMR | P0A805 | |
DIP | DIP-48120N | |
IntAct | P0A805 | |
MINT | MINT-1308979 | |
STRING | 511145.b0172 | |
SWISS-2DPAGE | P0A805 | |
PaxDb | P0A805 | |
PRIDE | P0A805 | |
EnsemblBacteria | AAC73283 BAB96748 | |
GeneID | 12930756 946122 | |
KEGG | ecj:Y75_p0168 eco:b0172 | |
PATRIC | 32115453 | |
EchoBASE | EB0331 | |
EcoGene | EG10335 | |
eggNOG | COG0233 | |
HOGENOM | HOG000040143 | |
InParanoid | P0A805 | |
KO | K02838 | |
OMA | TPLNQVG | |
OrthoDB | EOG6SV5F9 | |
PhylomeDB | P0A805 | |
BioCyc | EcoCyc:EG10335-MONOMER ECOL316407:JW0167-MONOMER | |
EvolutionaryTrace | P0A805 | |
PRO | PR:P0A805 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0A805 | |
GO | GO:0005737 GO:0043023 GO:0002184 | |
HAMAP | MF_00040 | |
InterPro | IPR002661 IPR023584 | |
PANTHER | PTHR20982 | |
Pfam | PF01765 | |
SUPFAM | SSF55194 | |
TIGRFAMs | TIGR00496 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0043023 |
ribosomal large subunit binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10335 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006412 |
translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000469808 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10335 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002184 |
cytoplasmic translational termination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10335 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043023 |
ribosomal large subunit binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0002184 |
cytoplasmic translational termination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006412 |
translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000075851 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006415 |
translational termination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000075851 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006412 |
translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Ishino, T et al. (2000) Interaction of ribosome recycling factor and elongation factor EF-G with E. coli ribosomes studied by the surface plasmon resonance technique. Genes Cells 5 953-63 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ Lopez-Campistrous, A et al. (2005) Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Mol. Cell Proteomics 4 1205-9 PubMed GONUTS page
- ↑ Pavlov, MY et al. (1997) Fast recycling of Escherichia coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3. EMBO J. 16 4134-41 PubMed GONUTS page
- ↑ Kung, HF et al. (1977) DNA-directed synthesis in vitro of beta-galactosidase: requirement for a ribosome release factor. Proc. Natl. Acad. Sci. U.S.A. 74 3217-21 PubMed GONUTS page
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