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ECOLI:KDPE
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | kdpE | |
| Protein Name(s) | KDP operon transcriptional regulatory protein KdpE | |
| External Links | ||
| UniProt | P21866 | |
| EMBL | M36066 U00096 AP009048 | |
| PIR | E64804 | |
| RefSeq | NP_415222.1 YP_488974.1 | |
| PDB | 1ZH2 1ZH4 3ZQ7 4KFC 4KNY 4L85 | |
| PDBsum | 1ZH2 1ZH4 3ZQ7 4KFC 4KNY 4L85 | |
| ProteinModelPortal | P21866 | |
| SMR | P21866 | |
| DIP | DIP-10063N | |
| IntAct | P21866 | |
| STRING | 511145.b0694 | |
| PaxDb | P21866 | |
| EnsemblBacteria | AAC73788 BAA35351 | |
| GeneID | 12930930 945302 | |
| KEGG | ecj:Y75_p0673 eco:b0694 | |
| PATRIC | 32116583 | |
| EchoBASE | EB0512 | |
| EcoGene | EG10517 | |
| eggNOG | COG0745 | |
| HOGENOM | HOG000034815 | |
| InParanoid | P21866 | |
| KO | K07667 | |
| OMA | LEGEGCR | |
| OrthoDB | EOG6G4VQG | |
| PhylomeDB | P21866 | |
| BioCyc | EcoCyc:KDPE-MONOMER ECOL316407:JW5096-MONOMER RETL1328306-WGS:GSTH-6121-MONOMER | |
| EvolutionaryTrace | P21866 | |
| PRO | PR:P21866 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P21866 | |
| GO | GO:0005737 GO:0000986 GO:0001131 GO:0000160 GO:0006355 GO:0001121 | |
| Gene3D | 1.10.10.10 | |
| InterPro | IPR011006 IPR001867 IPR001789 IPR011991 | |
| Pfam | PF00072 PF00486 | |
| SMART | SM00448 SM00862 | |
| SUPFAM | SSF52172 | |
| PROSITE | PS50110 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10020 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000156 |
phosphorelay response regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10061 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0001216 |
DNA-binding transcription activator activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000986 |
bacterial-type proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0001216 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Polarek, JW et al. (1992) The products of the kdpDE operon are required for expression of the Kdp ATPase of Escherichia coli. J. Bacteriol. 174 2145-51 PubMed GONUTS page
- ↑ 3.0 3.1 Sugiura, A et al. (1992) Clarification of the structural and functional features of the osmoregulated kdp operon of Escherichia coli. Mol. Microbiol. 6 1769-76 PubMed GONUTS page
- ↑ Narayanan, A et al. (2012) Structure-function studies of DNA binding domain of response regulator KdpE reveals equal affinity interactions at DNA half-sites. PLoS ONE 7 e30102 PubMed GONUTS page
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