ECOLI:AER

Species (Taxon ID)	Escherichia coli (strain K12). (83333)
Gene Name(s)	aer (synonyms: air, yqjJ)
Protein Name(s)	Aerotaxis receptor
External Links
UniProt	P50466
EMBL	U28379 U00096 AP009048
PIR	E65095
RefSeq	NP_417543.1 YP_491263.1
ProteinModelPortal	P50466
SMR	P50466
DIP	DIP-9061N
IntAct	P50466
STRING	511145.b3072
PaxDb	P50466
PRIDE	P50466
EnsemblBacteria	AAC76107 BAE77122
GeneID	12933405 945301
KEGG	ecj:Y75_p2997 eco:b3072
PATRIC	32121560
EchoBASE	EB2789
EcoGene	EG12955
eggNOG	COG2202
HOGENOM	HOG000148074
InParanoid	P50466
KO	K03776
OMA	MPVRWRI
OrthoDB	EOG6G4VQG
PhylomeDB	P50466
BioCyc	EcoCyc:G7595-MONOMER ECOL316407:JW3043-MONOMER
PRO	PR:P50466
Proteomes	UP000000318 UP000000625
Genevestigator	P50466
GO	GO:0016021 GO:0005886 GO:0042802 GO:0004871 GO:0052131 GO:0007165
InterPro	IPR004090 IPR003660 IPR004089 IPR001610 IPR000014 IPR013655
Pfam	PF00672 PF00015 PF08447
PRINTS	PR00260
SMART	SM00283 SM00086 SM00091
SUPFAM	SSF55785
TIGRFAMs	TIGR00229
PROSITE	PS50111

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
	GO:0052131	positive aerotaxis	PMID:9190831^[1]	ECO:0000315			P	See "Air bubble assays for aerotaxis" and Figure 2: Aerotaxis assays.	complete CACAO 10486
involved_in	GO:0006935	chemotaxis	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10987 EcoGene:EG10988 EcoGene:EG11018 EcoGene:EG11034 PANTHER:PTN002079588	P	Seeded From UniProt	complete
part_of	GO:0005887	integral component of plasma membrane	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10988 EcoGene:EG11018 EcoGene:EG11034 PANTHER:PTN002460933	C	Seeded From UniProt	complete
enables	GO:0004888	transmembrane signaling receptor activity	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG10987 EcoGene:EG10988 EcoGene:EG11018 EcoGene:EG11034 PANTHER:PTN002460933	F	Seeded From UniProt	complete
enables	GO:0042802	identical protein binding	PMID:21665965^[3]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:P50466	F	Seeded From UniProt	complete
enables	GO:0042802	identical protein binding	PMID:21097634^[4]	ECO:0000353	physical interaction evidence used in manual assertion	UniProtKB:P50466	F	Seeded From UniProt	complete
involved_in	GO:0052131	positive aerotaxis	PMID:9190831^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0007165	signal transduction	PMID:10844669^[5]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:17309111^[6]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	PMID:15919996^[7]	ECO:0000314	direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0004888	transmembrane signaling receptor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004090	F	Seeded From UniProt	complete
involved_in	GO:0006935	chemotaxis	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004090	P	Seeded From UniProt	complete
involved_in	GO:0007165	signal transduction	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR003660 InterPro:IPR004089 InterPro:IPR004090	P	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004089 InterPro:IPR004090	C	Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR003660	C	Seeded From UniProt	complete
part_of	GO:0005886	plasma membrane	GO_REF:0000037 GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-1003 UniProtKB-KW:KW-0997 UniProtKB-SubCell:SL-0037	C	Seeded From UniProt	complete
involved_in	GO:0007165	signal transduction	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0807	P	Seeded From UniProt	complete
part_of	GO:0016021	integral component of membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0812	C	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
involved_in	GO:0006935	chemotaxis	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0145	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Bibikov, SI et al. (1997) A signal transducer for aerotaxis in Escherichia coli. J. Bacteriol. 179 4075-9 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ Watts, KJ et al. (2011) Different conformations of the kinase-on and kinase-off signaling states in the Aer HAMP domain. J. Bacteriol. 193 4095-103 PubMed GONUTS page
↑ Campbell, AJ et al. (2011) Role of the F1 region in the Escherichia coli aerotaxis receptor Aer. J. Bacteriol. 193 358-66 PubMed GONUTS page
↑ Repik, A et al. (2000) PAS domain residues involved in signal transduction by the Aer redox sensor of Escherichia coli. Mol. Microbiol. 36 806-16 PubMed GONUTS page
↑ Zhang, N et al. (2007) Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 7 484-93 PubMed GONUTS page
↑ Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page

[PMID:9190831-1] 1.0 ^1.1 Bibikov, SI et al. (1997) A signal transducer for aerotaxis in Escherichia coli. J. Bacteriol. 179 4075-9 PubMed GONUTS page

[PMID:21873635-2] 2.0 ^2.1 ^2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21665965-3] Watts, KJ et al. (2011) Different conformations of the kinase-on and kinase-off signaling states in the Aer HAMP domain. J. Bacteriol. 193 4095-103 PubMed GONUTS page

[PMID:21097634-4] Campbell, AJ et al. (2011) Role of the F1 region in the Escherichia coli aerotaxis receptor Aer. J. Bacteriol. 193 358-66 PubMed GONUTS page

[PMID:10844669-5] Repik, A et al. (2000) PAS domain residues involved in signal transduction by the Aer redox sensor of Escherichia coli. Mol. Microbiol. 36 806-16 PubMed GONUTS page

[PMID:17309111-6] Zhang, N et al. (2007) Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Proteomics 7 484-93 PubMed GONUTS page

[PMID:15919996-7] Daley, DO et al. (2005) Global topology analysis of the Escherichia coli inner membrane proteome. Science 308 1321-3 PubMed GONUTS page

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ECOLI:AER

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