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ECODH:B1XDM6
Contents
Species (Taxon ID) | Escherichia coli (strain K12 / DH10B). (316385) | |
Gene Name(s) | recB (ECO:0000313 with EMBL:ACB03930.1) | |
Protein Name(s) | Exonuclease V (RecBCD complex), beta subunit (ECO:0000313 with EMBL:ACB03930.1) | |
External Links | ||
UniProt | B1XDM6 | |
EMBL | CP000948 | |
RefSeq | YP_001731708.1 | |
ProteinModelPortal | B1XDM6 | |
SMR | B1XDM6 | |
STRING | 316385.ECDH10B_2990 | |
EnsemblBacteria | ACB03930 | |
GeneID | 6061947 | |
KEGG | ecd:ECDH10B_2990 | |
PATRIC | 18465899 | |
eggNOG | COG1074 | |
HOGENOM | HOG000258330 | |
KO | K03582 | |
OMA | HIGELLQ | |
OrthoDB | EOG6677M1 | |
BioCyc | ECOL316385:GJ8B-2870-MONOMER | |
Proteomes | UP000001689 | |
GO | GO:0005524 GO:0004003 GO:0003677 GO:0008854 GO:0006281 | |
Gene3D | 3.40.50.300 3.90.320.10 | |
InterPro | IPR014017 IPR000212 IPR004586 IPR011604 IPR027417 IPR011335 IPR014016 | |
PANTHER | PTHR11070 | |
Pfam | PF00580 PF13361 | |
SUPFAM | SSF52540 SSF52980 | |
TIGRFAMs | TIGR00609 | |
PROSITE | PS51198 PS51217 |
Annotations
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
GO:0000166 |
nucleotide binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0004003 |
ATP-dependent DNA helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0004386 |
helicase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0004518 |
nuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0006281 |
DNA repair |
IMP: Inferred from Mutant Phenotype |
P |
Figure 6 shows DNA repairing proficiency of RecBK28QCD, RecBD1118A, and RecBCDK229Q enzymes of P. syringae. |
complete | |||
GO:0004518 |
nuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0004527 |
exonuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
InterPro:IPR000212 |
F |
Seeded From UniProt |
complete | ||
GO:0005524 |
ATP binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0006281 |
DNA repair |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0006281 |
DNA repair |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0006974 |
cellular response to DNA damage stimulus |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0008854 |
exodeoxyribonuclease V activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0016787 |
hydrolase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0016787 |
hydrolase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Pavankumar, TL et al. (2010) All three subunits of RecBCD enzyme are essential for DNA repair and low-temperature growth in the Antarctic Pseudomonas syringae Lz4W. PLoS ONE 5 e9412 PubMed GONUTS page