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ECODH:B1XDM6

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Species (Taxon ID) Escherichia coli (strain K12 / DH10B). (316385)
Gene Name(s) recB (ECO:0000313 with EMBL:ACB03930.1)
Protein Name(s) Exonuclease V (RecBCD complex), beta subunit (ECO:0000313 with EMBL:ACB03930.1)
External Links
UniProt B1XDM6
EMBL CP000948
RefSeq YP_001731708.1
ProteinModelPortal B1XDM6
SMR B1XDM6
STRING 316385.ECDH10B_2990
EnsemblBacteria ACB03930
GeneID 6061947
KEGG ecd:ECDH10B_2990
PATRIC 18465899
eggNOG COG1074
HOGENOM HOG000258330
KO K03582
OMA HIGELLQ
OrthoDB EOG6677M1
BioCyc ECOL316385:GJ8B-2870-MONOMER
Proteomes UP000001689
GO GO:0005524
GO:0004003
GO:0003677
GO:0008854
GO:0006281
Gene3D 3.40.50.300
3.90.320.10
InterPro IPR014017
IPR000212
IPR004586
IPR011604
IPR027417
IPR011335
IPR014016
PANTHER PTHR11070
Pfam PF00580
PF13361
SUPFAM SSF52540
SSF52980
TIGRFAMs TIGR00609
PROSITE PS51198
PS51217

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

GO:0003677

DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000212
InterPro:IPR011604

F

Seeded From UniProt

complete

GO:0004003

ATP-dependent DNA helicase activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000212

F

Seeded From UniProt

complete

GO:0004386

helicase activity

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0347

F

Seeded From UniProt

complete

GO:0004518

nuclease activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011604

F

Seeded From UniProt

complete

GO:0006281

DNA repair

PMID:20195537[1]

IMP: Inferred from Mutant Phenotype

P

Figure 6 shows DNA repairing proficiency of RecBK28QCD, RecBD1118A, and RecBCDK229Q enzymes of P. syringae.

complete
CACAO 4917

GO:0004518

nuclease activity

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0540

F

Seeded From UniProt

complete

GO:0004527

exonuclease activity

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0269

F

Seeded From UniProt

complete

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000212
InterPro:IPR004586
InterPro:IPR014016
InterPro:IPR014017

F

Seeded From UniProt

complete

GO:0005524

ATP binding

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

GO:0006281

DNA repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004586

P

Seeded From UniProt

complete

GO:0006281

DNA repair

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

GO:0008854

exodeoxyribonuclease V activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR004586

F

Seeded From UniProt

complete

GO:0016787

hydrolase activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR014017

F

Seeded From UniProt

complete

GO:0016787

hydrolase activity

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011604

P

Seeded From UniProt

complete

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0540

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Pavankumar, TL et al. (2010) All three subunits of RecBCD enzyme are essential for DNA repair and low-temperature growth in the Antarctic Pseudomonas syringae Lz4W. PLoS ONE 5 e9412 PubMed GONUTS page