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ECOD1:C9QT00

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Species (Taxon ID) Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 /DH1). (536056)
Gene Name(s) fimD (ECO:0000313 with EMBL:BAJ46031.1)
Protein Name(s) Fimbrial biogenesis outer membrane usher protein (ECO:0000313 with EMBL:ACX41291.1)

Outer membrane protein export and assembly of type 1 fimbriae (ECO:0000313 with EMBL:BAJ46031.1)

External Links
UniProt C9QT00
EMBL CP001637
AP012030
RefSeq YP_006093580.1
YP_006131576.1
ProteinModelPortal C9QT00
SMR C9QT00
EnsemblBacteria ACX41291
BAJ46031
GeneID 12707317
12872203
KEGG edh:EcDH1_3680
edj:ECDH1ME8569_4175
PATRIC 36699931
HOGENOM HOG000111414
KO K07347
OMA SVWRHAS
Proteomes UP000002619
UP000004998
GO GO:0009279
GO:0016021
GO:0005215
InterPro IPR000015
IPR018030
IPR025949
IPR025885
PANTHER PTHR30451
Pfam PF13953
PF13954
PF00577
PROSITE PS01151

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0042710

biofilm formation

PMID:25012525[1]

IDA: Inferred from Direct Assay

P

Figure 1: Characterization of Biofilm Producers

complete
CACAO 10649

GO:0005215

transporter activity

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000015

F

Seeded From UniProt

complete

GO:0005886

plasma membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

GO:0006810

transport

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000015

P

Seeded From UniProt

complete

GO:0006810

transport

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0813

P

Seeded From UniProt

complete

GO:0009279

cell outer membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0998

C

Seeded From UniProt

complete

GO:0009279

cell outer membrane

GO_REF:0000040

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0040

C

Seeded From UniProt

complete

GO:0016020

membrane

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000015

C

Seeded From UniProt

complete

GO:0016020

membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

GO:0016021

integral component of membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Nascimento, HH et al. (2014) Phenotypic and genotypic characteristics associated with biofilm formation in clinical isolates of atypical enteropathogenic Escherichia coli (aEPEC) strains. BMC Microbiol. 14 184 PubMed GONUTS page