GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOD1:C9QT00
Contents
Species (Taxon ID) | Escherichia coli (strain ATCC 33849 / DSM 4235 / NCIB 12045 / K12 /DH1). (536056) | |
Gene Name(s) | fimD (ECO:0000313 with EMBL:BAJ46031.1) | |
Protein Name(s) | Fimbrial biogenesis outer membrane usher protein (ECO:0000313 with EMBL:ACX41291.1)
Outer membrane protein export and assembly of type 1 fimbriae (ECO:0000313 with EMBL:BAJ46031.1) | |
External Links | ||
UniProt | C9QT00 | |
EMBL | CP001637 AP012030 | |
RefSeq | YP_006093580.1 YP_006131576.1 | |
ProteinModelPortal | C9QT00 | |
SMR | C9QT00 | |
EnsemblBacteria | ACX41291 BAJ46031 | |
GeneID | 12707317 12872203 | |
KEGG | edh:EcDH1_3680 edj:ECDH1ME8569_4175 | |
PATRIC | 36699931 | |
HOGENOM | HOG000111414 | |
KO | K07347 | |
OMA | SVWRHAS | |
Proteomes | UP000002619 UP000004998 | |
GO | GO:0009279 GO:0016021 GO:0005215 | |
InterPro | IPR000015 IPR018030 IPR025949 IPR025885 | |
PANTHER | PTHR30451 | |
Pfam | PF13953 PF13954 PF00577 | |
PROSITE | PS01151 |
Annotations
Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
---|---|---|---|---|---|---|---|---|
GO:0042710 |
biofilm formation |
IDA: Inferred from Direct Assay |
P |
Figure 1: Characterization of Biofilm Producers |
complete | |||
GO:0005215 |
transporter activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
complete | |||
GO:0005886 |
plasma membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
GO:0006810 |
transport |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0006810 |
transport |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
complete | |||
GO:0009279 |
cell outer membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
GO:0009279 |
cell outer membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
GO:0016020 |
membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
GO:0016020 |
membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
GO:0016021 |
integral component of membrane |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Nascimento, HH et al. (2014) Phenotypic and genotypic characteristics associated with biofilm formation in clinical isolates of atypical enteropathogenic Escherichia coli (aEPEC) strains. BMC Microbiol. 14 184 PubMed GONUTS page