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DROME:Q9VMW4
Contents
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | No Information Provided. (synonyms: Rtnl1-RA (ECO:0000313 with EMBL:ACU30168.1)) | |
| Protein Name(s) | Reticulon-like protein (ECO:0000256 with RuleBase:RU363132) | |
| External Links | ||
| UniProt | Q9VMW4 | |
| EMBL | AE014134 BT099529 | |
| RefSeq | NP_787987.1 | |
| UniGene | Dm.1559 | |
| STRING | 7227.FBpp0290753 | |
| EnsemblMetazoa | FBtr0079042 | |
| GeneID | 33721 | |
| UCSC | CG33113-RA | |
| CTD | 33721 | |
| FlyBase | FBgn0053113 | |
| eggNOG | KOG1792 ENOG410XPKH | |
| GeneTree | ENSGT00390000009934 | |
| OMA | RYSRNNS | |
| OrthoDB | EOG091G0TIO | |
| Reactome | [www.reactome.org/content/detail/R-DME-193634 R-DME-193634] [www.reactome.org/content/detail/R-DME-8849932 R-DME-8849932] | |
| ChiTaRS | Rtnl1 | |
| GenomeRNAi | 33721 | |
| Proteomes | UP000000803 | |
| Bgee | FBgn0053113 | |
| GO | GO:0030424 GO:0005737 GO:0005829 GO:0012505 GO:0005783 GO:0005789 GO:0045169 GO:0016021 GO:0005811 GO:0005790 GO:0007029 GO:0002121 GO:0042048 | |
| InterPro | IPR003388 | |
| Pfam | PF02453 | |
| PROSITE | PS50845 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0045169 |
fusome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
| GO:0045169 |
fusome |
ECO:0000314 |
C |
Organism: Drosophila (fruit fly) Protein: Reticulon-like protein Figure 6. A.Rtnl1-GFP is still localized to the fusome |
complete | |||||
|
part_of |
GO:0005790 |
smooth endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
| GO:0005874 |
microtubule |
ECO:0000314 |
C |
Organism: Drosophila (fruit fly) Protein: Reticulon-like protein Figure 6: Co-localization of Rtnl1 with microtubules and Exu |
complete | |||||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0012505 |
endomembrane system |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007029 |
endoplasmic reticulum organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005790 |
smooth endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0045169 |
fusome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000417752 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000417752 |
C |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Röper, K (2007) Rtnl1 is enriched in a specialized germline ER that associates with ribonucleoprotein granule components. J. Cell. Sci. 120 1081-92 PubMed GONUTS page
- ↑ 2.0 2.1 Pokrywka, NJ et al. () Microtubules, the ER and Exu: new associations revealed by analysis of mini spindles mutations. Mech. Dev. 126 289-300 PubMed GONUTS page
- ↑ 3.0 3.1 Wakefield, S & Tear, G (2006) The Drosophila reticulon, Rtnl-1, has multiple differentially expressed isoforms that are associated with a sub-compartment of the endoplasmic reticulum. Cell. Mol. Life Sci. 63 2027-38 PubMed GONUTS page
- ↑ 4.0 4.1 Lye, CM et al. (2014) Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos. Development 141 4006-17 PubMed GONUTS page
- ↑ Tan, DJ et al. (2009) Mapping organelle proteins and protein complexes in Drosophila melanogaster. J. Proteome Res. 8 2667-78 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 O'Sullivan, NC et al. (2012) Reticulon-like-1, the Drosophila orthologue of the hereditary spastic paraplegia gene reticulon 2, is required for organization of endoplasmic reticulum and of distal motor axons. Hum. Mol. Genet. 21 3356-65 PubMed GONUTS page
- ↑ Lighthouse, DV et al. (2008) New components of the Drosophila fusome suggest it plays novel roles in signaling and transport. Dev. Biol. 317 59-71 PubMed GONUTS page
