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DROME:Q9VMW4

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Species (Taxon ID) Drosophila melanogaster (Fruit fly). (7227)
Gene Name(s) No Information Provided. (synonyms: Rtnl1-RA (ECO:0000313 with EMBL:ACU30168.1))
Protein Name(s) Reticulon-like protein (ECO:0000256 with RuleBase:RU363132)
External Links
UniProt Q9VMW4
EMBL AE014134
BT099529
RefSeq NP_787987.1
UniGene Dm.1559
STRING 7227.FBpp0290753
EnsemblMetazoa FBtr0079042
GeneID 33721
UCSC CG33113-RA
CTD 33721
FlyBase FBgn0053113
eggNOG KOG1792
ENOG410XPKH
GeneTree ENSGT00390000009934
OMA RYSRNNS
OrthoDB EOG091G0TIO
Reactome [www.reactome.org/content/detail/R-DME-193634 R-DME-193634]
[www.reactome.org/content/detail/R-DME-8849932 R-DME-8849932]
ChiTaRS Rtnl1
GenomeRNAi 33721
Proteomes UP000000803
Bgee FBgn0053113
GO GO:0030424
GO:0005737
GO:0005829
GO:0012505
GO:0005783
GO:0005789
GO:0045169
GO:0016021
GO:0005811
GO:0005790
GO:0007029
GO:0002121
GO:0042048
InterPro IPR003388
Pfam PF02453
PROSITE PS50845

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0002121

inter-male aggressive behavior

PMID:19519879[1]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0005737

cytoplasm

PMID:16847576[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005737

cytoplasm

PMID:19303437[3]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005783

endoplasmic reticulum

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0256

C

Seeded From UniProt

GO:0005783

endoplasmic reticulum

PMID:16847576[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005783

endoplasmic reticulum

PMID:25294944[4]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005789

endoplasmic reticulum membrane

GO_REF:0000040

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0097

C

Seeded From UniProt

GO:0005789

endoplasmic reticulum membrane

GO_REF:0000104

IEA: Inferred from Electronic Annotation

UniRule:RU363132

C

Seeded From UniProt

GO:0005790

smooth endoplasmic reticulum

PMID:17327273[5]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005790

smooth endoplasmic reticulum

PMID:22543973[6]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005811

lipid particle

PMID:16543254[7]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005829

cytosol

PMID:25294944[4]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0007029

endoplasmic reticulum organization

PMID:22543973[6]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0012505

endomembrane system

PMID:19317464[8]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0016020

membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0472

C

Seeded From UniProt

GO:0016021

integral component of membrane

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0812

C

Seeded From UniProt

GO:0016021

integral component of membrane

GO_REF:0000104

IEA: Inferred from Electronic Annotation

UniRule:RU363132

C

Seeded From UniProt

GO:0030424

axon

PMID:22543973[6]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0042048

olfactory behavior

PMID:17028343[9]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0045169

fusome

PMID:17327273[5]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0045169

fusome

PMID:18355804[10]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0045169

fusome

PMID:17327273[5]

IDA: Inferred from Direct Assay

C

Organism: Drosophila (fruit fly) Protein: Reticulon-like protein Figure 6. A.Rtnl1-GFP is still localized to the fusome

complete

GO:0005874

microtubule

PMID:19303437[3]

IDA: Inferred from Direct Assay

C

Organism: Drosophila (fruit fly) Protein: Reticulon-like protein Figure 6: Co-localization of Rtnl1 with microtubules and Exu

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Edwards, AC et al. (2009) Mutations in many genes affect aggressive behavior in Drosophila melanogaster. BMC Biol. 7 29 PubMed GONUTS page
  2. 2.0 2.1 Wakefield, S & Tear, G (2006) The Drosophila reticulon, Rtnl-1, has multiple differentially expressed isoforms that are associated with a sub-compartment of the endoplasmic reticulum. Cell. Mol. Life Sci. 63 2027-38 PubMed GONUTS page
  3. 3.0 3.1 Pokrywka, NJ et al. () Microtubules, the ER and Exu: new associations revealed by analysis of mini spindles mutations. Mech. Dev. 126 289-300 PubMed GONUTS page
  4. 4.0 4.1 Lye, CM et al. (2014) Subcellular localisations of the CPTI collection of YFP-tagged proteins in Drosophila embryos. Development 141 4006-17 PubMed GONUTS page
  5. 5.0 5.1 5.2 Röper, K (2007) Rtnl1 is enriched in a specialized germline ER that associates with ribonucleoprotein granule components. J. Cell. Sci. 120 1081-92 PubMed GONUTS page
  6. 6.0 6.1 6.2 O'Sullivan, NC et al. (2012) Reticulon-like-1, the Drosophila orthologue of the hereditary spastic paraplegia gene reticulon 2, is required for organization of endoplasmic reticulum and of distal motor axons. Hum. Mol. Genet. 21 3356-65 PubMed GONUTS page
  7. Beller, M et al. (2006) Characterization of the Drosophila lipid droplet subproteome. Mol. Cell Proteomics 5 1082-94 PubMed GONUTS page
  8. Tan, DJ et al. (2009) Mapping organelle proteins and protein complexes in Drosophila melanogaster. J. Proteome Res. 8 2667-78 PubMed GONUTS page
  9. Sambandan, D et al. (2006) Dynamic genetic interactions determine odor-guided behavior in Drosophila melanogaster. Genetics 174 1349-63 PubMed GONUTS page
  10. Lighthouse, DV et al. (2008) New components of the Drosophila fusome suggest it plays novel roles in signaling and transport. Dev. Biol. 317 59-71 PubMed GONUTS page