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DANRE:S4TLP4

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) znf219 (ECO:0000313 with ZFIN:ZDB-GENE-110623-1)
Protein Name(s) Znf219-like protein (ECO:0000313 with EMBL:AGE89832.1)
External Links
UniProt S4TLP4
EMBL JX141438
RefSeq NP_001277346.1
GeneID 102997060
KEGG dre:102997060
CTD 51222
ZFIN ZDB-GENE-110623-1
GO GO:0046872
GO:0003676
GO:0030903
Gene3D 3.30.160.60
InterPro IPR007087
IPR015880
IPR013087
Pfam PF00096
SMART SM00355
PROSITE PS00028
PS50157

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001077

RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

F

Figure 6A shows that in mutants who express the Znf219-Like protein, activity at the promotor of the col2a1 gene is substantially increased when compared to the wild-type control.

complete
CACAO 9686

GO:0001077

transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

F

Seeded From UniProt

complete

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR013087

F

Seeded From UniProt

complete

GO:0006366

transcription from RNA polymerase II promoter

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0030903

notochord development

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-131220-3

P

Seeded From UniProt

complete

GO:0030903

notochord development

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-131220-4

P

Seeded From UniProt

complete

GO:0045944

positive regulation of transcription from RNA polymerase II promoter

PMID:24155663[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0046872

metal ion binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007087

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Lien, HW et al. (2013) A novel zinc finger protein 219-like (ZNF219L) is involved in the regulation of collagen type 2 alpha 1a (col2a1a) gene expression in zebrafish notochord. Int. J. Biol. Sci. 9 872-86 PubMed GONUTS page