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DANRE:Q6K198
Contents
Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
Gene Name(s) | nfkb2 (ECO:0000313 with ZFIN:ZDB-GENE-030131-6701) | |
Protein Name(s) | p100/P52 transcription factor (ECO:0000313 with EMBL:AAO26403.1) | |
External Links | ||
UniProt | Q6K198 | |
EMBL | AY163838 | |
UniGene | Dr.117553 | |
ProteinModelPortal | Q6K198 | |
ZFIN | ZDB-GENE-030131-6701 | |
eggNOG | KOG0504 COG0666 | |
HOVERGEN | HBG052613 | |
PhylomeDB | Q6K198 | |
GO | GO:0005737 GO:0005634 GO:0003677 GO:0003700 GO:0001525 GO:0007165 | |
CDD | cd00204 cd01177 | |
Gene3D | 1.25.40.20 2.60.40.10 2.60.40.340 | |
InterPro | IPR002110 IPR020683 IPR036770 IPR011029 IPR000488 IPR013783 IPR014756 IPR002909 IPR033926 IPR000451 IPR008967 IPR030492 IPR032397 IPR011539 IPR037059 | |
PANTHER | PTHR24169 | |
Pfam | PF00023 PF12796 PF16179 PF00554 | |
PRINTS | PR00057 | |
SMART | SM00248 SM00005 SM00429 | |
SUPFAM | SSF47986 SSF48403 SSF49417 SSF81296 | |
PROSITE | PS50297 PS50088 PS01204 PS50254 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0007498 |
mesoderm development |
ECO:0000315 |
P |
Figure 6. p100 Zebra Fish |
complete | |||||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-171006-5 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000451 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000451 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007165 |
signal transduction |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Correa, RG et al. (2004) Characterization of NF-kappa B/I kappa B proteins in zebra fish and their involvement in notochord development. Mol. Cell. Biol. 24 5257-68 PubMed GONUTS page
- ↑ Fu, CY et al. (2017) Competitive binding between Seryl-tRNA synthetase/YY1 complex and NFKB1 at the distal segment results in differential regulation of human vegfa promoter activity during angiogenesis. Nucleic Acids Res. 45 2423-2437 PubMed GONUTS page