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DANRE:Q6K198

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) nfkb2 (ECO:0000313 with ZFIN:ZDB-GENE-030131-6701)
Protein Name(s) p100/P52 transcription factor (ECO:0000313 with EMBL:AAO26403.1)
External Links
UniProt Q6K198
EMBL AY163838
UniGene Dr.117553
ProteinModelPortal Q6K198
ZFIN ZDB-GENE-030131-6701
eggNOG KOG0504
COG0666
HOVERGEN HBG052613
PhylomeDB Q6K198
GO GO:0005737
GO:0005634
GO:0003677
GO:0003700
GO:0001525
GO:0007165
CDD cd00204
cd01177
Gene3D 1.25.40.20
2.60.40.10
2.60.40.340
InterPro IPR002110
IPR020683
IPR036770
IPR011029
IPR000488
IPR013783
IPR014756
IPR002909
IPR033926
IPR000451
IPR008967
IPR030492
IPR032397
IPR011539
IPR037059
PANTHER PTHR24169
Pfam PF00023
PF12796
PF16179
PF00554
PRINTS PR00057
SMART SM00248
SM00005
SM00429
SUPFAM SSF47986
SSF48403
SSF49417
SSF81296
PROSITE PS50297
PS50088
PS01204
PS50254

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0007498

mesoderm development

PMID:15169890[1]

ECO:0000315

P

Figure 6. p100 Zebra Fish

complete
CACAO 13301

involved_in

GO:0001525

angiogenesis

PMID:27913726[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

ZFIN:ZDB-MRPHLNO-171006-5

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011539
InterPro:IPR037059

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000451
InterPro:IPR008967
InterPro:IPR011539
InterPro:IPR037059

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000451

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000451

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000451
InterPro:IPR008967
InterPro:IPR011539
InterPro:IPR037059

P

Seeded From UniProt

complete

involved_in

GO:0007165

signal transduction

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000488

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Correa, RG et al. (2004) Characterization of NF-kappa B/I kappa B proteins in zebra fish and their involvement in notochord development. Mol. Cell. Biol. 24 5257-68 PubMed GONUTS page
  2. Fu, CY et al. (2017) Competitive binding between Seryl-tRNA synthetase/YY1 complex and NFKB1 at the distal segment results in differential regulation of human vegfa promoter activity during angiogenesis. Nucleic Acids Res. 45 2423-2437 PubMed GONUTS page