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DANRE:F1R8Z9

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) foxj1b
Protein Name(s) Uncharacterized protein
External Links
UniProt F1R8Z9
EMBL CR318663
CU207309
RefSeq XP_005156198.1
UniGene Dr.37893
Ensembl ENSDART00000126676
GeneID 494105
KEGG dre:494105
CTD 494105
ZFIN ZDB-GENE-041212-76
GeneTree ENSGT00750000117242
OMA DPQYADM
OrthoDB EOG7T4MKM
TreeFam TF333250
GO GO:0043565
GO:0003700
Gene3D 1.10.10.10
InterPro IPR001766
IPR018122
IPR011991
Pfam PF00250
PRINTS PR00053
SMART SM00339
PROSITE PS00657
PS00658
PS50039

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000981

RNA polymerase II transcription factor activity, sequence-specific DNA binding

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN001371846

F

Seeded From UniProt

complete

GO:0001947

heart looping

PMID:19284996[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

GO:0003146

heart jogging

PMID:19284996[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

GO:0003677

DNA binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

GO:0003700

transcription factor activity, sequence-specific DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001766
InterPro:IPR018122

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN001371846

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

GO:0006351

transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001766
InterPro:IPR018122

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

Seeded From UniProt

complete

GO:0006357

regulation of transcription from RNA polymerase II promoter

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN001371846

P

Seeded From UniProt

complete

GO:0007368

determination of left/right symmetry

PMID:19284996[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-090513-3

P

Seeded From UniProt

complete

GO:0030030

cell projection organization

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0970

P

Seeded From UniProt

complete

GO:0030154

cell differentiation

GO_REF:0000033

IBA: Inferred from Biological aspect of Ancestor

PANTHER:PTN001371846

P

Seeded From UniProt

complete

GO:0042384

cilium assembly

PMID:19011630[2]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR001766
InterPro:IPR018122

F

Seeded From UniProt

complete

GO:0060088

auditory receptor cell stereocilium organization

PMID:21205793[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-111118-14

P

Seeded From UniProt

complete

GO:0060088

auditory receptor cell stereocilium organization

PMID:21205793[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-101117-4

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Tian, T et al. (2009) Both foxj1a and foxj1b are implicated in left-right asymmetric development in zebrafish embryos. Biochem. Biophys. Res. Commun. 380 537-42 PubMed GONUTS page
  2. Yu, X et al. (2008) Foxj1 transcription factors are master regulators of the motile ciliogenic program. Nat. Genet. 40 1445-53 PubMed GONUTS page
  3. 3.0 3.1 Yu, X et al. (2011) Cilia-driven fluid flow as an epigenetic cue for otolith biomineralization on sensory hair cells of the inner ear. Development 138 487-94 PubMed GONUTS page