It is now the 5th OPEN Period for CACAO Fall 2017! It will end on Tuesday November 21, 2017 at 11:59 pm CST
This is your chance to make annotations OR challenge other team's annotations. You may also DEFEND or suggest improvements to your own annotations IF they have been challenged. Please note, although we ENCOURAGE challenges, an excess of identical challenges that do not appear to be applicable to the annotation or well thought out will be considered spam and ignored.

Have any questions? Please email us at ecoliwiki@gmail.com

DANRE:F1QGL1

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) No Information Provided.
Protein Name(s) Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000114372)
External Links
UniProt F1QGL1
EMBL CR450710
RefSeq XP_697956.4
UniGene Dr.116391
Dr.159483
Dr.159570
Dr.33371
Ensembl ENSDART00000016208
ENSDART00000135230
GeneID 569471
KEGG dre:569471
CTD 55636
ZFIN ZDB-GENE-070912-179
GeneTree ENSGT00760000119067
KO K14437
OMA ALMKTDR
TreeFam TF313572
Proteomes UP000000437
GO GO:0005634
GO:0005524
GO:0003677
GO:0016817
GO:0030282
GO:0051216
GO:0021602
GO:0007368
GO:0048701
GO:0001947
GO:0042472
GO:0014029
GO:0060041
GO:0009303
GO:0001756
Gene3D 3.40.50.300
InterPro IPR006576
IPR023780
IPR000953
IPR016197
IPR014001
IPR001650
IPR027417
IPR000330
Pfam PF07533
PF00385
PF00271
PF00176
SMART SM00592
SM00298
SM00487
SM00490
SUPFAM SSF52540
SSF54160
PROSITE PS50013
PS51192
PS51194

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001756

somitogenesis

PMID:21901784[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0001756

somitogenesis

PMID:21901784[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-2

P

Seeded From UniProt

complete

GO:0001756

somitogenesis

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0001947

heart looping

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000330

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000038

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0007368

determination of left/right symmetry

PMID:21901784[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0009303

rRNA transcription

PMID:23920116[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-131211-1
ZFIN:ZDB-MRPHLNO-131211-4

P

Seeded From UniProt

complete

GO:0014029

neural crest formation

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0016817

hydrolase activity, acting on acid anhydrides

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR006576

F

Seeded From UniProt

complete

GO:0021602

cranial nerve morphogenesis

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0030282

bone mineralization

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0042472

inner ear morphogenesis

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

GO:0043009

chordate embryonic development

PMID:23920116[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-131211-1

P

Seeded From UniProt

complete

GO:0048701

embryonic cranial skeleton morphogenesis

PMID:23920116[3]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-MRPHLNO-131211-1
ZFIN:ZDB-MRPHLNO-131211-4

P

Seeded From UniProt

complete

GO:0048701

embryonic cranial skeleton morphogenesis

PMID:23920116[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-131211-1

P

Seeded From UniProt

complete

GO:0048840

otolith development

PMID:25472840[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-2

P

Seeded From UniProt

complete

GO:0051216

cartilage development

PMID:23920116[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-131211-1

P

Seeded From UniProt

complete

GO:0060041

retina development in camera-type eye

PMID:22363697[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-111012-1

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Jacobs-McDaniels, NL & Albertson, RC (2011) Chd7 plays a critical role in controlling left-right symmetry during zebrafish somitogenesis. Dev. Dyn. 240 2272-80 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Patten, SA et al. (2012) Role of Chd7 in zebrafish: a model for CHARGE syndrome. PLoS ONE 7 e31650 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 Balow, SA et al. (2013) Knockdown of fbxl10/kdm2bb rescues chd7 morphant phenotype in a zebrafish model of CHARGE syndrome. Dev. Biol. 382 57-69 PubMed GONUTS page
  4. Balasubramanian, R et al. (2014) Functionally compromised CHD7 alleles in patients with isolated GnRH deficiency. Proc. Natl. Acad. Sci. U.S.A. 111 17953-8 PubMed GONUTS page