DANRE:F1QDZ3

Species (Taxon ID)	Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s)	No Information Provided.
Protein Name(s)	Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000111576)
External Links
UniProt	F1QDZ3
EMBL	CU855796
Ensembl	ENSDART00000124464
ZFIN	ZDB-GENE-001103-2
GeneTree	ENSGT00760000118988
InParanoid	F1QDZ3
Proteomes	UP000000437
Bgee	F1QDZ3
GO	GO:0005634 GO:0000981 GO:0051216 GO:0035118 GO:0061008 GO:0048839 GO:0050935 GO:0030318 GO:0043049 GO:0030916 GO:0060021 GO:0031016 GO:0060041
Gene3D	1.10.30.10
InterPro	IPR009071 IPR029548 IPR022151
PANTHER	PTHR10270:SF212
Pfam	PF00505 PF12444
SMART	SM00398
SUPFAM	SSF47095
PROSITE	PS50118

Annotations

Qualifier	GO ID	GO term name	Reference	Evidence Code	with/from	Aspect	Notes	Status
	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR029548	F	Seeded From UniProt	complete
	GO:0003170	heart valve development	PMID:23775563^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-050322-1	P	Seeded From UniProt	complete
	GO:0003342	proepicardium development	PMID:23775563^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0003342	proepicardium development	PMID:23775563^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-050322-1	P	Seeded From UniProt	complete
	GO:0005634	nucleus	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR029548	C	Seeded From UniProt	complete
	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR029548	P	Seeded From UniProt	complete
	GO:0006357	regulation of transcription from RNA polymerase II promoter	GO_REF:0000002	IEA: Inferred from Electronic Annotation	InterPro:IPR029548	P	Seeded From UniProt	complete
	GO:0030318	melanocyte differentiation	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0030916	otic vesicle formation	PMID:15689370^[2]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-030219-2	P	Seeded From UniProt	complete
	GO:0031016	pancreas development	PMID:22537488^[3]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-120612-2	P	Seeded From UniProt	complete
	GO:0031016	pancreas development	PMID:22719264^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-120612-2	P	Seeded From UniProt	complete
	GO:0035118	embryonic pectoral fin morphogenesis	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0035118	embryonic pectoral fin morphogenesis	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041110-4 ZFIN:ZDB-MRPHLNO-050322-1	P	Seeded From UniProt	complete
	GO:0043049	otic placode formation	PMID:12668634^[5]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-030219-2	P	Seeded From UniProt	complete
	GO:0043049	otic placode formation	PMID:12668634^[5]	IMP: Inferred from Mutant Phenotype		P	Seeded From UniProt	complete
	GO:0048839	inner ear development	PMID:19132125^[6]	IGI: Inferred from Genetic Interaction	ZFIN:ZDB-GENO-980202-1565 ZFIN:ZDB-MRPHLNO-070130-7 ZFIN:ZDB-MRPHLNO-090422-9	P	Seeded From UniProt	complete
	GO:0048839	inner ear development	PMID:19132125^[6]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-070130-7 ZFIN:ZDB-MRPHLNO-090422-9	P	Seeded From UniProt	complete
	GO:0050935	iridophore differentiation	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0051216	cartilage development	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0051216	cartilage development	PMID:15689370^[2]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-041110-4 ZFIN:ZDB-MRPHLNO-050322-1	P	Seeded From UniProt	complete
	GO:0060021	palate development	PMID:22052544^[7]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-100428-3	P	Seeded From UniProt	complete
	GO:0060041	retina development in camera-type eye	PMID:19210963^[8]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-081106-1	P	Seeded From UniProt	complete
	GO:0061008	hepaticobiliary system development	PMID:22719264^[4]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-120612-2	P	Seeded From UniProt	complete
	GO:0061032	visceral serous pericardium development	PMID:23775563^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-GENO-050322-1	P	Seeded From UniProt	complete
	GO:0061032	visceral serous pericardium development	PMID:23775563^[1]	IMP: Inferred from Mutant Phenotype	ZFIN:ZDB-MRPHLNO-050322-1	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 Hofsteen, P et al. (2013) Sox9b is required for epicardium formation and plays a role in TCDD-induced heart malformation in zebrafish. Mol. Pharmacol. 84 353-60 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 Yan, YL et al. (2005) A pair of Sox: distinct and overlapping functions of zebrafish sox9 co-orthologs in craniofacial and pectoral fin development. Development 132 1069-83 PubMed GONUTS page
↑ Manfroid, I et al. (2012) Zebrafish sox9b is crucial for hepatopancreatic duct development and pancreatic endocrine cell regeneration. Dev. Biol. 366 268-78 PubMed GONUTS page
↑ ^4.0 ^4.1 Delous, M et al. (2012) Sox9b is a key regulator of pancreaticobiliary ductal system development. PLoS Genet. 8 e1002754 PubMed GONUTS page
↑ ^5.0 ^5.1 Liu, D et al. (2003) Fgf3 and Fgf8 dependent and independent transcription factors are required for otic placode specification. Development 130 2213-24 PubMed GONUTS page
↑ ^6.0 ^6.1 Dutton, K et al. () A zebrafish model for Waardenburg syndrome type IV reveals diverse roles for Sox10 in the otic vesicle. Dis Model Mech 2 68-83 PubMed GONUTS page
↑ Nakamura, Y et al. (2012) Sox9 is upstream of microRNA-140 in cartilage. Appl. Biochem. Biotechnol. 166 64-71 PubMed GONUTS page
↑ Yokoi, H et al. (2009) Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation. Dev. Biol. 329 1-15 PubMed GONUTS page

[PMID:23775563-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 Hofsteen, P et al. (2013) Sox9b is required for epicardium formation and plays a role in TCDD-induced heart malformation in zebrafish. Mol. Pharmacol. 84 353-60 PubMed GONUTS page

[PMID:15689370-2] 2.0 ^2.1 ^2.2 ^2.3 ^2.4 ^2.5 ^2.6 Yan, YL et al. (2005) A pair of Sox: distinct and overlapping functions of zebrafish sox9 co-orthologs in craniofacial and pectoral fin development. Development 132 1069-83 PubMed GONUTS page

[PMID:22537488-3] Manfroid, I et al. (2012) Zebrafish sox9b is crucial for hepatopancreatic duct development and pancreatic endocrine cell regeneration. Dev. Biol. 366 268-78 PubMed GONUTS page

[PMID:22719264-4] 4.0 ^4.1 Delous, M et al. (2012) Sox9b is a key regulator of pancreaticobiliary ductal system development. PLoS Genet. 8 e1002754 PubMed GONUTS page

[PMID:12668634-5] 5.0 ^5.1 Liu, D et al. (2003) Fgf3 and Fgf8 dependent and independent transcription factors are required for otic placode specification. Development 130 2213-24 PubMed GONUTS page

[PMID:19132125-6] 6.0 ^6.1 Dutton, K et al. () A zebrafish model for Waardenburg syndrome type IV reveals diverse roles for Sox10 in the otic vesicle. Dis Model Mech 2 68-83 PubMed GONUTS page

[PMID:22052544-7] Nakamura, Y et al. (2012) Sox9 is upstream of microRNA-140 in cartilage. Appl. Biochem. Biotechnol. 166 64-71 PubMed GONUTS page

[PMID:19210963-8] Yokoi, H et al. (2009) Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation. Dev. Biol. 329 1-15 PubMed GONUTS page

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DANRE:F1QDZ3

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