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DANRE:F1QDZ3

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) No Information Provided.
Protein Name(s) Uncharacterized protein (ECO:0000313 with Ensembl:ENSDARP00000111576)
External Links
UniProt F1QDZ3
EMBL CU855796
Ensembl ENSDART00000124464
ZFIN ZDB-GENE-001103-2
GeneTree ENSGT00760000118988
InParanoid F1QDZ3
Proteomes UP000000437
Bgee F1QDZ3
GO GO:0005634
GO:0000981
GO:0051216
GO:0035118
GO:0061008
GO:0048839
GO:0050935
GO:0030318
GO:0043049
GO:0030916
GO:0060021
GO:0031016
GO:0060041
Gene3D 1.10.30.10
InterPro IPR009071
IPR029548
IPR022151
PANTHER PTHR10270:SF212
Pfam PF00505
PF12444
SMART SM00398
SUPFAM SSF47095
PROSITE PS50118

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000981

RNA polymerase II transcription factor activity, sequence-specific DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR029548

F

Seeded From UniProt

complete

GO:0003170

heart valve development

PMID:23775563[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-050322-1

P

Seeded From UniProt

complete

GO:0003342

proepicardium development

PMID:23775563[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0003342

proepicardium development

PMID:23775563[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-050322-1

P

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR029548

C

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR029548

P

Seeded From UniProt

complete

GO:0006357

regulation of transcription from RNA polymerase II promoter

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR029548

P

Seeded From UniProt

complete

GO:0030318

melanocyte differentiation

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0030916

otic vesicle formation

PMID:15689370[2]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-030219-2

P

Seeded From UniProt

complete

GO:0031016

pancreas development

PMID:22537488[3]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-120612-2

P

Seeded From UniProt

complete

GO:0031016

pancreas development

PMID:22719264[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-120612-2

P

Seeded From UniProt

complete

GO:0035118

embryonic pectoral fin morphogenesis

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0035118

embryonic pectoral fin morphogenesis

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-041110-4
ZFIN:ZDB-MRPHLNO-050322-1

P

Seeded From UniProt

complete

GO:0043049

otic placode formation

PMID:12668634[5]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-030219-2

P

Seeded From UniProt

complete

GO:0043049

otic placode formation

PMID:12668634[5]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0048839

inner ear development

PMID:19132125[6]

IGI: Inferred from Genetic Interaction

ZFIN:ZDB-GENO-980202-1565
ZFIN:ZDB-MRPHLNO-070130-7
ZFIN:ZDB-MRPHLNO-090422-9

P

Seeded From UniProt

complete

GO:0048839

inner ear development

PMID:19132125[6]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-070130-7
ZFIN:ZDB-MRPHLNO-090422-9

P

Seeded From UniProt

complete

GO:0050935

iridophore differentiation

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0051216

cartilage development

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0051216

cartilage development

PMID:15689370[2]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-041110-4
ZFIN:ZDB-MRPHLNO-050322-1

P

Seeded From UniProt

complete

GO:0060021

palate development

PMID:22052544[7]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-100428-3

P

Seeded From UniProt

complete

GO:0060041

retina development in camera-type eye

PMID:19210963[8]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-081106-1

P

Seeded From UniProt

complete

GO:0061008

hepaticobiliary system development

PMID:22719264[4]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-120612-2

P

Seeded From UniProt

complete

GO:0061032

visceral serous pericardium development

PMID:23775563[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-GENO-050322-1

P

Seeded From UniProt

complete

GO:0061032

visceral serous pericardium development

PMID:23775563[1]

IMP: Inferred from Mutant Phenotype

ZFIN:ZDB-MRPHLNO-050322-1

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Hofsteen, P et al. (2013) Sox9b is required for epicardium formation and plays a role in TCDD-induced heart malformation in zebrafish. Mol. Pharmacol. 84 353-60 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Yan, YL et al. (2005) A pair of Sox: distinct and overlapping functions of zebrafish sox9 co-orthologs in craniofacial and pectoral fin development. Development 132 1069-83 PubMed GONUTS page
  3. Manfroid, I et al. (2012) Zebrafish sox9b is crucial for hepatopancreatic duct development and pancreatic endocrine cell regeneration. Dev. Biol. 366 268-78 PubMed GONUTS page
  4. 4.0 4.1 Delous, M et al. (2012) Sox9b is a key regulator of pancreaticobiliary ductal system development. PLoS Genet. 8 e1002754 PubMed GONUTS page
  5. 5.0 5.1 Liu, D et al. (2003) Fgf3 and Fgf8 dependent and independent transcription factors are required for otic placode specification. Development 130 2213-24 PubMed GONUTS page
  6. 6.0 6.1 Dutton, K et al. () A zebrafish model for Waardenburg syndrome type IV reveals diverse roles for Sox10 in the otic vesicle. Dis Model Mech 2 68-83 PubMed GONUTS page
  7. Nakamura, Y et al. (2012) Sox9 is upstream of microRNA-140 in cartilage. Appl. Biochem. Biotechnol. 166 64-71 PubMed GONUTS page
  8. Yokoi, H et al. (2009) Expression profiling of zebrafish sox9 mutants reveals that Sox9 is required for retinal differentiation. Dev. Biol. 329 1-15 PubMed GONUTS page