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CHLRE:B1B5J3

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Species (Taxon ID) Chlamydomonas reinhardtii (Chlamydomonas smithii). (3055)
Gene Name(s) ROC15 (ECO:0000313 with EMBL:BAG12976.1)
Protein Name(s) RHYTHM OF CHLOROPLAST 15 (ECO:0000313 with EMBL:BAG12976.1)
External Links
UniProt B1B5J3
EMBL AB363964
ProteinModelPortal B1B5J3
SMR B1B5J3
GO GO:0003682
GO:0003677
Gene3D 1.10.10.60
InterPro IPR009057
IPR017930
IPR006447
IPR001005
Pfam PF00249
SUPFAM SSF46689
TIGRFAMs TIGR01557
PROSITE PS51294

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009649

entrainment of circadian clock

PMID:23898163[1]

ECO:0000315

P

Figure 5A. Wildtype and roc15 mutant Chlamydomonas was entrained to a 12:12 light:dark cycle. The cultures were transferred to constant darkness and their tufA expression was measured with luminescence. They were then expressed to 5 minute long pulses of light. The wild type Chlamydomonas responded to the light pulses, evident by a phase shift in tufA expression. The roc15 mutant Chlamydomonas did not exhibit this phase shift. This indicate that roc15 is essential for circadian regulated phase shifts and entrainment.

complete
CACAO 9885

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009057

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Niwa, Y et al. (2013) Phase-resetting mechanism of the circadian clock in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. U.S.A. 110 13666-71 PubMed GONUTS page