CHICK:U5S1

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	EFTUD2 (synonyms: SNRP116)
Protein Name(s)	116 kDa U5 small nuclear ribonucleoprotein component Elongation factor Tu GTP-binding domain protein 2 U5 snRNP-specific protein, 116 kDa U5-116 kDa
External Links
UniProt	Q5F3X4
EMBL	AJ851526
RefSeq	NP_001026672.1
UniGene	Gga.21067
ProteinModelPortal	Q5F3X4
STRING	9031.ENSGALP00000001456
PaxDb	Q5F3X4
PRIDE	Q5F3X4
Ensembl	ENSGALT00000001458 ENSGALT00000040794
GeneID	428281
KEGG	gga:428281
CTD	9343
eggNOG	COG0480
GeneTree	ENSGT00770000120583
HOGENOM	HOG000231589
HOVERGEN	HBG001838
InParanoid	Q5F3X4
KO	K12852
OMA	PTDTSIK
PhylomeDB	Q5F3X4
Reactome	REACT_242586 REACT_244076
NextBio	20829319
PRO	PR:Q5F3X4
Proteomes	UP000000539
GO	GO:0015030 GO:0071013 GO:0005737 GO:0016020 GO:0016607 GO:0005525 GO:0003924 GO:0044822 GO:0006397 GO:0008380
Gene3D	3.30.230.10 3.30.70.240 3.40.50.300
InterPro	IPR000795 IPR009022 IPR000640 IPR027417 IPR020568 IPR014721 IPR005225 IPR009000 IPR005517 IPR004161
Pfam	PF00679 PF14492 PF03764 PF00009 PF03144
PRINTS	PR00315
SMART	SM00838 SM00889
SUPFAM	SSF50447 SSF52540 SSF54211 SSF54980
TIGRFAMs	TIGR00231
PROSITE	PS51722

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
part_of	GO:1990904	ribonucleoprotein complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0039566 MGI:MGI:95288 PANTHER:PTN000562745 PomBase:SPBC215.12 RGD:61979 SGD:S000001656 UniProtKB:P13639 UniProtKB:Q15029	C		Seeded From UniProt	complete
part_of	GO:0071007	U2-type catalytic step 2 spliceosome		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000562846 UniProtKB:Q15029	C		Seeded From UniProt	complete
part_of	GO:0046540	U4/U6 x U5 tri-snRNP complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000562846 SGD:S000001656 UniProtKB:Q15029	C		Seeded From UniProt	complete
enables	GO:0030623	U5 snRNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000562846 SGD:S000001656	F		Seeded From UniProt	complete
part_of	GO:0005829	cytosol		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG11837 PANTHER:PTN000562745 RGD:61979 TAIR:locus:2094548 TAIR:locus:2205235 UniProtKB:P13639 UniProtKB:Q15029	C		Seeded From UniProt	complete
enables	GO:0003924	GTPase activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	CGD:CAL0000189676 MGI:MGI:95288 PANTHER:PTN000562745 SGD:S000001656 SGD:S000002793 SGD:S000005107 UniProtKB:Q7Z2Z2	F		Seeded From UniProt	complete
involved_in	GO:0000398	mRNA splicing, via spliceosome		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000562846 SGD:S000001656	P		Seeded From UniProt	complete
enables	GO:0003924	GTPase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000795	F		Seeded From UniProt	complete
enables	GO:0005525	GTP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517	F		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0507	P		Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F		Seeded From UniProt	complete
enables	GO:0005525	GTP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0342	F		Seeded From UniProt	complete
involved_in	GO:0008380	RNA splicing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0508	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
part_of	GO:0005681	spliceosomal complex	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0747	C		Seeded From UniProt	complete
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