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CHICK:TBP

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) TBP
Protein Name(s) TATA-box-binding protein

TATA sequence-binding protein TATA-binding factor TATA-box factor Transcription initiation factor TFIID TBP subunit

External Links
UniProt O13270
EMBL D83127
D83126
D83135
PIR JC5513
RefSeq NP_990434.1
UniGene Gga.1006
ProteinModelPortal O13270
SMR O13270
STRING 9031.ENSGALP00000036925
GeneID 395995
KEGG gga:395995
CTD 6908
eggNOG COG2101
HOGENOM HOG000105164
HOVERGEN HBG044997
InParanoid O13270
KO K03120
PhylomeDB O13270
NextBio 20816058
PRO PR:O13270
Proteomes UP000000539
GO GO:0005634
GO:0003677
GO:0006352
Gene3D 3.30.310.10
HAMAP MF_00408
InterPro IPR012295
IPR000814
PANTHER PTHR10126
Pfam PF00352
PRINTS PR00686
PROSITE PS00351

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005669

transcription factor TFIID complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P20226

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P20226

C

Seeded From UniProt

complete

enables

GO:0000995

RNA polymerase III general transcription initiation factor activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P20226

F

Seeded From UniProt

complete

involved_in

GO:0006383

transcription by RNA polymerase III

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P20226

P

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P20226

P

Seeded From UniProt

complete

involved_in

GO:0070898

RNA polymerase III preinitiation complex assembly

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000013138
SGD:S000000950

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0010287
PANTHER:PTN000013136
UniProtKB:P20226
WB:WBGene00006542

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0261793
MGI:MGI:101838
PANTHER:PTN000013136
UniProtKB:P20226
UniProtKB:P52653
UniProtKB:Q8I440
ZFIN:ZDB-GENE-030616-563
ZFIN:ZDB-GENE-040520-2

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
PANTHER:PTN000013137
PomBase:SPAC29E6.08
RGD:67398
SGD:S000000950
UniProtKB:P20226
UniProtKB:Q8I440

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

CGD:CAL0000189736
FB:FBgn0010287
FB:FBgn0261793
PANTHER:PTN000013136

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261793
MGI:MGI:2684058
PANTHER:PTN000013136
RGD:67398
WB:WBGene00006542

F

Seeded From UniProt

complete

enables

GO:0001016

RNA polymerase III regulatory region DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000013138
SGD:S000000950

F

Seeded From UniProt

complete

enables

GO:0000979

RNA polymerase II core promoter sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261793
PANTHER:PTN000013136
PomBase:SPAC29E6.08
SGD:S000000950

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0010287
MGI:MGI:101838
PANTHER:PTN000013136
UniProtKB:P62380

F

Seeded From UniProt

complete

part_of

GO:0000126

transcription factor TFIIIB complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
PANTHER:PTN000013138
SGD:S000000950
dictyBase:DDB_G0275617

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0003700

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000814
InterPro:IPR033710

F

Seeded From UniProt

complete

involved_in

GO:0006352

DNA-templated transcription, initiation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000814
InterPro:IPR033710

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page