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CHICK:TBP
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | TBP | |
Protein Name(s) | TATA-box-binding protein
TATA sequence-binding protein TATA-binding factor TATA-box factor Transcription initiation factor TFIID TBP subunit | |
External Links | ||
UniProt | O13270 | |
EMBL | D83127 D83126 D83135 | |
PIR | JC5513 | |
RefSeq | NP_990434.1 | |
UniGene | Gga.1006 | |
ProteinModelPortal | O13270 | |
SMR | O13270 | |
STRING | 9031.ENSGALP00000036925 | |
GeneID | 395995 | |
KEGG | gga:395995 | |
CTD | 6908 | |
eggNOG | COG2101 | |
HOGENOM | HOG000105164 | |
HOVERGEN | HBG044997 | |
InParanoid | O13270 | |
KO | K03120 | |
PhylomeDB | O13270 | |
NextBio | 20816058 | |
PRO | PR:O13270 | |
Proteomes | UP000000539 | |
GO | GO:0005634 GO:0003677 GO:0006352 | |
Gene3D | 3.30.310.10 | |
HAMAP | MF_00408 | |
InterPro | IPR012295 IPR000814 | |
PANTHER | PTHR10126 | |
Pfam | PF00352 | |
PRINTS | PR00686 | |
PROSITE | PS00351 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005669 |
transcription factor TFIID complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000995 |
RNA polymerase III general transcription initiation factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006383 |
transcription by RNA polymerase III |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006366 |
transcription by RNA polymerase II |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070898 |
RNA polymerase III preinitiation complex assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000013138 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003687 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006366 |
transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003687 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005669 |
transcription factor TFIID complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003687 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000189736 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0261793 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001016 |
RNA polymerase III regulatory region DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000013138 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000979 |
RNA polymerase II core promoter sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0261793 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003687 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000126 |
transcription factor TFIIIB complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003687 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003700 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006352 |
DNA-templated transcription, initiation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
d
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- GO:0006355 ! regulation of DNA-templated transcription
- GO:0070898 ! RNA polymerase III preinitiation complex assembly
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- GO:0000995 ! RNA polymerase III general transcription initiation factor activity
- GO:0000979 ! RNA polymerase II core promoter sequence-specific DNA binding
- GO:0001016 ! RNA polymerase III transcription regulatory region sequence-specific DNA binding
t
- Testudines + Archosauria group
- Theropoda
- GO:0008134 ! transcription factor binding
- GO:0000126 ! transcription factor TFIIIB complex
- GO:0006366 ! transcription by RNA polymerase II
- GO:0006383 ! transcription by RNA polymerase III
- GO:0005667 ! transcription regulator complex
- GO:0005669 ! transcription factor TFIID complex