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CHICK:SPT5H

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SUPT5H
Protein Name(s) Transcription elongation factor SPT5

DRB sensitivity-inducing factor large subunit DSIF large subunit

External Links
UniProt Q5ZI08
EMBL AJ720976
RefSeq NP_001026555.1
UniGene Gga.7037
ProteinModelPortal Q5ZI08
SMR Q5ZI08
STRING 9031.ENSGALP00000023081
PaxDb Q5ZI08
GeneID 426493
KEGG gga:426493
CTD 6829
eggNOG COG0250
HOVERGEN HBG079775
InParanoid Q5ZI08
KO K15172
PhylomeDB Q5ZI08
NextBio 20828050
PRO PR:Q5ZI08
Proteomes UP000000539
GO GO:0032044
GO:0032784
GO:0006357
GO:0006351
InterPro IPR005824
IPR006645
IPR024945
IPR022581
IPR017071
IPR005100
IPR008991
Pfam PF00467
PF03439
PF11942
PIRSF PIRSF036945
SMART SM01104
SM00739
SM00738
SUPFAM SSF50104

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0032044

DSIF complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O00267

C

Seeded From UniProt

complete

part_of

GO:0032044

DSIF complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0040273
PANTHER:PTN000122628
PomBase:SPAC23C4.19
SGD:S000004470
UniProtKB:O00267

C

Seeded From UniProt

complete

involved_in

GO:0006368

transcription elongation from RNA polymerase II promoter

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0040273
PANTHER:PTN000122628
UniProtKB:O00267

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000122628
ZFIN:ZDB-GENE-001207-1

P

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0040273
PANTHER:PTN000122628

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006645
InterPro:IPR036735

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017071
InterPro:IPR039659

P

Seeded From UniProt

complete

involved_in

GO:0032784

regulation of DNA-templated transcription, elongation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017071
InterPro:IPR039659

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page