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CHICK:SODC

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SOD1
Protein Name(s) Superoxide dismutase [Cu-Zn]
External Links
UniProt P80566
EMBL U28407
PIR S65436
RefSeq NP_990395.1
UniGene Gga.3346
ProteinModelPortal P80566
SMR P80566
BioGrid 676211
IntAct P80566
STRING 9031.ENSGALP00000035996
PaxDb P80566
PRIDE P80566
GeneID 395938
KEGG gga:395938
CTD 6647
eggNOG COG2032
HOGENOM HOG000263447
HOVERGEN HBG000062
InParanoid P80566
KO K04565
PhylomeDB P80566
NextBio 20816003
PRO PR:P80566
Proteomes UP000000539
GO GO:0005737
GO:0005634
GO:0046872
GO:0004784
Gene3D 2.60.40.200
InterPro IPR018152
IPR001424
Pfam PF00080
PRINTS PR00068
SUPFAM SSF49329
PROSITE PS00087
PS00332

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005623

cell

PMID:25086240[1]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000019)

Seeded From UniProt

complete

involved_in

GO:0019430

removal of superoxide radicals

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0033631
MGI:MGI:98351
PANTHER:PTN000000113
PomBase:SPAC22E12.04
RGD:3731
UniProtKB:P00442
WB:WBGene00004930

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002467128
UniProtKB:P00441
WB:WBGene00004930

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002558032
RGD:3731
UniProtKB:P00441

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002467128
RGD:3731
UniProtKB:P00441

C

Seeded From UniProt

complete

enables

GO:0005507

copper ion binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13419
PANTHER:PTN000000113
RGD:3731
UniProtKB:O14618
UniProtKB:P00441
UniProtKB:P00442
WB:WBGene00004930

F

Seeded From UniProt

complete

enables

GO:0004784

superoxide dismutase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG13419
FB:FBgn0003462
FB:FBgn0033631
MGI:MGI:103181
MGI:MGI:98351
PANTHER:PTN000000113
PomBase:SPAC821.10c
RGD:3731
RGD:3733
SGD:S000003865
TAIR:locus:2025595
TAIR:locus:2046168
UniProtKB:P00441
UniProtKB:P00442
UniProtKB:P9WGE9
WB:WBGene00004930
WB:WBGene00004933
dictyBase:DDB_G0267420
dictyBase:DDB_G0282993

F

Seeded From UniProt

complete

enables

GO:0004784

superoxide dismutase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018152

F

Seeded From UniProt

complete

involved_in

GO:0006801

superoxide metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001424
InterPro:IPR036423

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001424
InterPro:IPR036423

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018152

P

Seeded From UniProt

complete

enables

GO:0004784

superoxide dismutase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.15.1.1

F

Seeded From UniProt

complete

enables

GO:0016209

antioxidant activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0049

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Labas, V et al. (2015) Qualitative and quantitative peptidomic and proteomic approaches to phenotyping chicken semen. J Proteomics 112 313-35 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page