CHICK:SIX6

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	SIX6 (synonyms: OPTX2, SIX9)
Protein Name(s)	Homeobox protein SIX6 Optic homeobox 2 Sine oculis homeobox homolog 6 Six9 protein
External Links
UniProt	O93307
EMBL	AF050131 AJ011786
RefSeq	NP_990325.1
UniGene	Gga.333
ProteinModelPortal	O93307
Ensembl	ENSGALT00000037367
GeneID	395843
KEGG	gga:395843
CTD	4990
GeneTree	ENSGT00540000070251
HOVERGEN	HBG003609
InParanoid	O93307
OMA	TASMFQL
PhylomeDB	O93307
NextBio	20815910
PRO	PR:O93307
Proteomes	UP000000539
GO	GO:0005634 GO:0003677 GO:0001205 GO:0007275
Gene3D	1.10.10.60
InterPro	IPR001356 IPR009057
Pfam	PF00046
SMART	SM00389
SUPFAM	SSF46689
PROSITE	PS50071

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:0048856	anatomical structure development		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:102780 MGI:MGI:106034 PANTHER:PTN000044272	P		Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:102764 MGI:MGI:106034 MGI:MGI:106220 PANTHER:PTN000044272 RGD:620909 UniProtKB:O95343	P		Seeded From UniProt	complete
part_of	GO:0005667	transcription factor complex		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:102780 PANTHER:PTN000044272	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0003460 MGI:MGI:102764 MGI:MGI:102778 MGI:MGI:102780 MGI:MGI:106034 MGI:MGI:106220 MGI:MGI:1341840 PANTHER:PTN000044272 RGD:620906 UniProtKB:Q15475 WB:WBGene00000453 WB:WBGene00000455 WB:WBGene00006775	C		Seeded From UniProt	complete
involved_in	GO:0001654	eye development		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:102764 PANTHER:PTN002470536 UniProtKB:O95343 ZFIN:ZDB-GENE-050522-308 ZFIN:ZDB-GENE-990415-128 ZFIN:ZDB-GENE-990825-28	P		Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000044272 ZFIN:ZDB-GENE-040718-155	F		Seeded From UniProt	complete
enables	GO:0000976	transcription regulatory region sequence-specific DNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000044272 dictyBase:DDB_G0272967	F		Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0000981	P		Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0000981	P		Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR032947	F		Seeded From UniProt	complete
involved_in	GO:0001654	eye development	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR032947	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001356 InterPro:IPR009057	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR032947	P		Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR032947	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037 GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0371 UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0217	P		Seeded From UniProt	complete
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References

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