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CHICK:RBM38

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) RBM38
Protein Name(s) RNA-binding protein 38

RNA-binding motif protein 38

External Links
UniProt Q5ZJX4
EMBL AJ720310
UniGene Gga.5690
ProteinModelPortal Q5ZJX4
SMR Q5ZJX4
STRING 9031.ENSGALP00000012347
PaxDb Q5ZJX4
eggNOG NOG248750
HOGENOM HOG000276232
HOVERGEN HBG108399
InParanoid Q5ZJX4
PhylomeDB Q5ZJX4
PRO PR:Q5ZJX4
Proteomes UP000000539
ExpressionAtlas Q5ZJX4
GO GO:0005829
GO:0005634
GO:0003730
GO:0000166
GO:0070935
GO:0007050
GO:0030154
GO:0006977
GO:0006978
GO:0006397
GO:0008285
GO:0010830
GO:0043484
GO:0008380
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:1990904

ribonucleoprotein complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0001215
FB:FBgn0004237
FB:FBgn0004838
MGI:MGI:1916394
PANTHER:PTN002689974
UniProtKB:P09651
UniProtKB:P19338
UniProtKB:P22626
UniProtKB:Q14103
UniProtKB:Q96EP5
UniProtKB:Q99729

C

Seeded From UniProt

complete

involved_in

GO:0070935

3'-UTR-mediated mRNA stabilization

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002544152
UniProtKB:Q9H0Z9

P

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002690849
ZFIN:ZDB-GENE-040628-1

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002544150
UniProtKB:Q9BX46
UniProtKB:Q9H0Z9

C

Seeded From UniProt

complete

enables

GO:0003730

mRNA 3'-UTR binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:3610364
PANTHER:PTN002544152
UniProtKB:Q9H0Z9

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1889294
PANTHER:PTN002690849
TAIR:locus:2044370
TAIR:locus:2086325
TAIR:locus:2102435
UniProtKB:F4I321
UniProtKB:Q8LF90
UniProtKB:Q9H0Z9
UniProtKB:Q9SHZ6

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104819
MGI:MGI:1330294
MGI:MGI:893588
MGI:MGI:97286
PANTHER:PTN002689974
RGD:1306751
RGD:1310403
RGD:1310906
RGD:3153
RGD:69234
SGD:S000003391
SGD:S000005483
TAIR:locus:2019622
TAIR:locus:2076096
TAIR:locus:2079874
TAIR:locus:2083810
TAIR:locus:2122009
TAIR:locus:2159401
TAIR:locus:2179939
UniProtKB:P19338
UniProtKB:P22626
UniProtKB:P38159
UniProtKB:P62995
UniProtKB:Q03250
UniProtKB:Q13148
UniProtKB:Q14103
UniProtKB:Q9SVM8

F

Seeded From UniProt

complete

involved_in

GO:0010830

regulation of myotube differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q62176
ensembl:ENSMUSP00000133816

P

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q62176
ensembl:ENSMUSP00000133816

F

Seeded From UniProt

complete

involved_in

GO:0043484

regulation of RNA splicing

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9H0Z9
ensembl:ENSP00000348538

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0091

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page