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CHICK:RAG2
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | RAG2 | |
Protein Name(s) | V(D)J recombination-activating protein 2
RAG-2 | |
External Links | ||
UniProt | P25022 | |
EMBL | M58531 | |
PIR | S42510 | |
ProteinModelPortal | P25022 | |
SMR | P25022 | |
STRING | 9031.ENSGALP00000012883 | |
PaxDb | P25022 | |
Ensembl | ENSGALT00000012898 | |
eggNOG | NOG39310 | |
GeneTree | ENSGT00390000012559 | |
HOGENOM | HOG000237346 | |
HOVERGEN | HBG006694 | |
InParanoid | P25022 | |
OMA | FGQKGWP | |
OrthoDB | EOG73804B | |
PhylomeDB | P25022 | |
TreeFam | TF331236 | |
PRO | PR:P25022 | |
Proteomes | UP000000539 | |
ExpressionAtlas | P25022 | |
GO | GO:0005634 GO:0003682 GO:0003677 GO:0035064 GO:0035091 GO:0005547 GO:0043325 GO:0080025 GO:0005546 GO:0008270 GO:0030183 GO:0002358 GO:0002326 GO:0016568 GO:0046622 GO:0002331 GO:0033077 GO:0002360 GO:0033151 | |
Gene3D | 2.120.10.80 | |
InterPro | IPR011043 IPR015915 IPR004321 IPR025162 IPR011011 | |
PANTHER | PTHR10960 | |
Pfam | PF03089 PF13341 | |
SUPFAM | SSF50965 SSF57903 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
enables |
GO:0080025 |
phosphatidylinositol-3,5-bisphosphate binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043325 |
phosphatidylinositol-3,4-bisphosphate binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035091 |
phosphatidylinositol binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033151 |
V(D)J recombination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033077 |
T cell differentiation in thymus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030183 |
B cell differentiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005547 |
phosphatidylinositol-3,4,5-trisphosphate binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005546 |
phosphatidylinositol-4,5-bisphosphate binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0097519 |
DNA recombinase complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002590007 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002590007 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033151 |
V(D)J recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97849 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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- Phasianidae
- Phasianinae
- GO:0043325 ! phosphatidylinositol-3,4-bisphosphate binding
- GO:0035091 ! phosphatidylinositol binding
- GO:0080025 ! phosphatidylinositol-3,5-bisphosphate binding
- GO:0005547 ! phosphatidylinositol-3,4,5-trisphosphate binding
- GO:0005546 ! phosphatidylinositol-4,5-bisphosphate binding