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CHICK:RAG2

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) RAG2
Protein Name(s) V(D)J recombination-activating protein 2

RAG-2

External Links
UniProt P25022
EMBL M58531
PIR S42510
ProteinModelPortal P25022
SMR P25022
STRING 9031.ENSGALP00000012883
PaxDb P25022
Ensembl ENSGALT00000012898
eggNOG NOG39310
GeneTree ENSGT00390000012559
HOGENOM HOG000237346
HOVERGEN HBG006694
InParanoid P25022
OMA FGQKGWP
OrthoDB EOG73804B
PhylomeDB P25022
TreeFam TF331236
PRO PR:P25022
Proteomes UP000000539
ExpressionAtlas P25022
GO GO:0005634
GO:0003682
GO:0003677
GO:0035064
GO:0035091
GO:0005547
GO:0043325
GO:0080025
GO:0005546
GO:0008270
GO:0030183
GO:0002358
GO:0002326
GO:0016568
GO:0046622
GO:0002331
GO:0033077
GO:0002360
GO:0033151
Gene3D 2.120.10.80
InterPro IPR011043
IPR015915
IPR004321
IPR025162
IPR011011
PANTHER PTHR10960
Pfam PF03089
PF13341
SUPFAM SSF50965
SSF57903

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0080025

phosphatidylinositol-3,5-bisphosphate binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0043325

phosphatidylinositol-3,4-bisphosphate binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0035091

phosphatidylinositol binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

involved_in

GO:0033151

V(D)J recombination

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

P

Seeded From UniProt

complete

involved_in

GO:0033077

T cell differentiation in thymus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

P

Seeded From UniProt

complete

involved_in

GO:0030183

B cell differentiation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

P

Seeded From UniProt

complete

enables

GO:0008270

zinc ion binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0005547

phosphatidylinositol-3,4,5-trisphosphate binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0005546

phosphatidylinositol-4,5-bisphosphate binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P21784

F

Seeded From UniProt

complete

part_of

GO:0097519

DNA recombinase complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002590007
ZFIN:ZDB-GENE-990415-235

C

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002590007
ZFIN:ZDB-GENE-990415-235

F

Seeded From UniProt

complete

involved_in

GO:0033151

V(D)J recombination

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97849
PANTHER:PTN002590007
ZFIN:ZDB-GENE-990415-235

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004321

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004321

C

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004321

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

involved_in

GO:0006310

DNA recombination

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0233

P

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page