GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:Q9PUR3

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) No Information Provided.
Protein Name(s) Iroquois-related homeobox transcription factor IRX3 (ECO:0000313 with EMBL:AAD55977.1)
External Links
UniProt Q9PUR3
EMBL AF157620
UniGene Gga.342
ProteinModelPortal Q9PUR3
PhylomeDB Q9PUR3
GO GO:0005634
GO:0043565
GO:0006355
Gene3D 1.10.10.60
InterPro IPR017970
IPR001356
IPR008422
IPR009057
Pfam PF05920
SMART SM00389
SUPFAM SSF46689
PROSITE PS00027
PS50071

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0030424

axon

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

C

Seeded From UniProt

complete

involved_in

GO:0009954

proximal/distal pattern formation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0009953

dorsal/ventral pattern formation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0007498

mesoderm development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0007420

brain development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

C

Seeded From UniProt

complete

involved_in

GO:0001840

neural plate development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0001822

kidney development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0001656

metanephros development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0072196

proximal/distal pattern formation involved in pronephric nephron development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0072086

specification of loop of Henle identity

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0072047

proximal/distal pattern formation involved in nephron development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0072005

maintenance of kidney identity

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0048793

pronephros development

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0045666

positive regulation of neuron differentiation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0045666

positive regulation of neuron differentiation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0045665

negative regulation of neuron differentiation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:P81067

P

Seeded From UniProt

complete

involved_in

GO:0045665

negative regulation of neuron differentiation

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

involved_in

GO:0039005

specification of pronephric tubule identity

PMID:10457021[1]

ECO:0000247

sequence alignment evidence used in manual assertion

UniProtKB:O42261

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001356
InterPro:IPR008422
InterPro:IPR009057

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR008422
InterPro:IPR017970

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017970

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0371

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000401037

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000401037

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 1.19 1.20 1.21 1.22 Funayama, N et al. (1999) Coelom formation: binary decision of the lateral plate mesoderm is controlled by the ectoderm. Development 126 4129-38 PubMed GONUTS page