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CHICK:Q9DDU8

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) TRA2B (ECO:0000313 with Ensembl:ENSGALP00000010541)
Protein Name(s) Transformer-2 beta (ECO:0000313 with EMBL:AAG35783.1)

Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000010541)

External Links
UniProt Q9DDU8
EMBL AADN03005771
AF282244
RefSeq NP_990009.1
UniGene Gga.4158
SMR Q9DDU8
STRING 9031.ENSGALP00000010541
Ensembl ENSGALT00000010555
GeneID 395403
KEGG gga:395403
CTD 6434
eggNOG NOG297815
GeneTree ENSGT00710000106295
HOGENOM HOG000276232
KO K12897
OMA YSRDTDH
OrthoDB EOG7SFHZZ
TreeFam TF106265
NextBio 20815487
PRO PR:Q9DDU8
Proteomes UP000000539
GO GO:0005634
GO:0003729
GO:0000166
GO:0000398
GO:0048026
GO:0000381
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:1990904

ribonucleoprotein complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0001215
FB:FBgn0004237
FB:FBgn0004838
MGI:MGI:1916394
PANTHER:PTN002689974
UniProtKB:P09651
UniProtKB:P19338
UniProtKB:P22626
UniProtKB:Q14103
UniProtKB:Q96EP5
UniProtKB:Q99729

C

Seeded From UniProt

complete

involved_in

GO:0048026

positive regulation of mRNA splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106016
PANTHER:PTN000391532
RGD:1306751
UniProtKB:P62995

P

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000391532
UniProtKB:P62995

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104819
MGI:MGI:1330294
MGI:MGI:893588
MGI:MGI:97286
PANTHER:PTN002689974
RGD:1306751
RGD:1310403
RGD:1310906
RGD:3153
RGD:69234
SGD:S000003391
SGD:S000005483
TAIR:locus:2019622
TAIR:locus:2076096
TAIR:locus:2079874
TAIR:locus:2083810
TAIR:locus:2122009
TAIR:locus:2159401
TAIR:locus:2179939
UniProtKB:P19338
UniProtKB:P22626
UniProtKB:P38159
UniProtKB:P62995
UniProtKB:Q03250
UniProtKB:Q13148
UniProtKB:Q14103
UniProtKB:Q9SVM8

F

Seeded From UniProt

complete

involved_in

GO:1990403

embryonic brain development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62996
ensembl:ENSMUSP00000124846

P

Seeded From UniProt

complete

involved_in

GO:0048026

positive regulation of mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62996
ensembl:ENSMUSP00000124846

P

Seeded From UniProt

complete

involved_in

GO:0021796

cerebral cortex regionalization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62996
ensembl:ENSMUSP00000124846

P

Seeded From UniProt

complete

part_of

GO:0005637

nuclear inner membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62996
ensembl:ENSMUSP00000124846

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62996
ensembl:ENSMUSP00000124846

C

Seeded From UniProt

complete

involved_in

GO:0071333

cellular response to glucose stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

involved_in

GO:0051259

protein complex oligomerization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

involved_in

GO:0048026

positive regulation of mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

involved_in

GO:0043484

regulation of RNA splicing

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

F

Seeded From UniProt

complete

enables

GO:0036002

pre-mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

F

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

F

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

C

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

F

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P62995
ensembl:ENSP00000416959

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414619

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page