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CHICK:Q6A2A9

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SOX5 (ECO:0000313 with EMBL:CAF25288.1)
Protein Name(s) Transcription factor LSox5-II (ECO:0000313 with EMBL:CAF25288.1)
External Links
UniProt Q6A2A9
EMBL AJ626988
UniGene Gga.37665
ProteinModelPortal Q6A2A9
SMR Q6A2A9
PRIDE Q6A2A9
HOGENOM HOG000056455
HOVERGEN HBG003915
PhylomeDB Q6A2A9
ExpressionAtlas Q6A2A9
GO GO:0044798
GO:0000981
GO:0044212
GO:0051216
GO:0045165
GO:0071560
GO:0021953
GO:0045892
GO:0048709
GO:0032332
GO:2000741
GO:0045944
GO:0060164
Gene3D 1.10.30.10
InterPro IPR009071
Pfam PF00505
SMART SM00398
SUPFAM SSF47095
PROSITE PS50118

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98367
MGI:MGI:98368
PANTHER:PTN000030844

P

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98367
MGI:MGI:98368
PANTHER:PTN000030844

P

Seeded From UniProt

complete

involved_in

GO:0045165

cell fate commitment

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98367
MGI:MGI:98368
PANTHER:PTN000030844

P

Seeded From UniProt

complete

involved_in

GO:0032332

positive regulation of chondrocyte differentiation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:98367
PANTHER:PTN000030891
UniProtKB:P35711

P

Seeded From UniProt

complete

involved_in

GO:2000741

positive regulation of mesenchymal stem cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35711
ensembl:ENSP00000398273

P

Seeded From UniProt

complete

involved_in

GO:0071560

cellular response to transforming growth factor beta stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35711
ensembl:ENSP00000398273

P

Seeded From UniProt

complete

involved_in

GO:0061036

positive regulation of cartilage development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35711
ensembl:ENSP00000398273

P

Seeded From UniProt

complete

involved_in

GO:0055059

asymmetric neuroblast division

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35711
ensembl:ENSP00000398273

P

Seeded From UniProt

complete

involved_in

GO:0032332

positive regulation of chondrocyte differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P35711
ensembl:ENSP00000398273

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000400811

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000400811

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page