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CHICK:Q5ZMR4

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) SRSF10 (ECO:0000313 with Ensembl:ENSGALP00000006566)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAG30979.1, ECO:0000313 with Ensembl:ENSGALP00000006566)
External Links
UniProt Q5ZMR4
EMBL AADN03008227
AJ719320
RefSeq NP_001026077.1
UniGene Gga.8379
STRING 9031.ENSGALP00000006566
PaxDb Q5ZMR4
Ensembl ENSGALT00000006576
GeneID 419689
KEGG gga:419689
CTD 10772
eggNOG NOG312850
GeneTree ENSGT00700000104403
HOGENOM HOG000276233
HOVERGEN HBG107480
KO K12900
OMA FAYVQYT
OrthoDB EOG73BVG8
PhylomeDB Q5ZMR4
TreeFam TF351864
NextBio 20822711
PRO PR:Q5ZMR4
Proteomes UP000000539
GO GO:0005654
GO:0000166
GO:0044822
GO:0016482
GO:0006376
GO:0048025
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045292

mRNA cis splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0260944
PANTHER:PTN000567445

P

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0265298
MGI:MGI:98283
MGI:MGI:98284
MGI:MGI:98285
MGI:MGI:98287
PANTHER:PTN000567445
RGD:1359422
TAIR:locus:2024770
TAIR:locus:2035651
TAIR:locus:2049766
TAIR:locus:2079502
TAIR:locus:2086804
TAIR:locus:2099931
TAIR:locus:2124799
TAIR:locus:2131864
TAIR:locus:2144945
TAIR:locus:2173338
TAIR:locus:2199837
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q01130
UniProtKB:Q07955
UniProtKB:Q08170
UniProtKB:Q13247
UniProtKB:Q96PK6
UniProtKB:Q9BRL6
UniProtKB:Q9BWF3

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0011305
FB:FBgn0011640
FB:FBgn0028554
FB:FBgn0260944
FB:FBgn0265298
FB:FBgn0283477
MGI:MGI:1100865
MGI:MGI:1333805
MGI:MGI:1921361
MGI:MGI:98283
MGI:MGI:98284
MGI:MGI:98285
MGI:MGI:98287
PANTHER:PTN000567445
PomBase:SPBC11C11.08
RGD:1309233
RGD:1359241
RGD:1359422
RGD:1561347
RGD:1587490
RGD:3664
TAIR:locus:2024770
TAIR:locus:2035651
TAIR:locus:2046638
TAIR:locus:2049766
TAIR:locus:2079502
TAIR:locus:2086804
TAIR:locus:2099931
TAIR:locus:2114643
TAIR:locus:2117706
TAIR:locus:2119797
TAIR:locus:2122990
TAIR:locus:2124799
TAIR:locus:2131864
TAIR:locus:2144945
TAIR:locus:2173088
TAIR:locus:2173338
TAIR:locus:2199837
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q01130
UniProtKB:Q07955
UniProtKB:Q08170
UniProtKB:Q13242
UniProtKB:Q13243
UniProtKB:Q13247
UniProtKB:Q16629
UniProtKB:Q8I3T5
UniProtKB:Q8I468
UniProtKB:Q96PK6
UniProtKB:Q9BQ04
UniProtKB:Q9BRL6
UniProtKB:Q9BWF3
UniProtKB:Q9Y4C8
WB:WBGene00004315
WB:WBGene00004699
WB:WBGene00004701
WB:WBGene00004703

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0011640
PANTHER:PTN000567445
RGD:3664
SGD:S000001016
UniProtKB:O75494
UniProtKB:P84103
UniProtKB:Q07955
UniProtKB:Q13247
UniProtKB:Q9BWF3

F

Seeded From UniProt

complete

involved_in

GO:0000395

mRNA 5'-splice site recognition

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000567522
UniProtKB:Q8WXF0

P

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004587
FB:FBgn0011305
FB:FBgn0028554
FB:FBgn0030479
FB:FBgn0260944
FB:FBgn0265298
FB:FBgn0283477
MGI:MGI:1100865
MGI:MGI:98284
PANTHER:PTN000567445
UniProtKB:P0DJD3
UniProtKB:Q13247
UniProtKB:Q8WXF0
UniProtKB:Q9BWF3

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0016482

C

Seeded From UniProt

complete

involved_in

GO:0048025

negative regulation of mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

P

Seeded From UniProt

complete

involved_in

GO:0048024

regulation of mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

P

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

C

Seeded From UniProt

complete

involved_in

GO:0006376

mRNA splice site selection

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

F

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

P

Seeded From UniProt

complete

involved_in

GO:0000375

RNA splicing, via transesterification reactions

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O75494
ensembl:ENSP00000420195

P

Seeded From UniProt

complete

involved_in

GO:0048025

negative regulation of mRNA splicing, via spliceosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0U0
ensembl:ENSMUSP00000101479

P

Seeded From UniProt

complete

involved_in

GO:0016482

cytosolic transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0U0
ensembl:ENSMUSP00000101479

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0U0
ensembl:ENSMUSP00000101479

C

Seeded From UniProt

complete

involved_in

GO:0000375

RNA splicing, via transesterification reactions

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9R0U0
ensembl:ENSMUSP00000101479

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A0S2Z504
ensembl:ENSP00000420195

C

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000504
InterPro:IPR035979

F

Seeded From UniProt

complete

involved_in

GO:0043484

regulation of RNA splicing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR034476

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414619

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page