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CHICK:Q5ZIE1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) GTF2E2 (ECO:0000313 with Ensembl:ENSGALP00000016708)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAG32502.1, ECO:0000313 with Ensembl:ENSGALP00000016708)
External Links
UniProt Q5ZIE1
EMBL AADN03003816
AJ720843
RefSeq NP_001012906.1
XP_001233400.1
XP_004941078.1
UniGene Gga.26205
SMR Q5ZIE1
STRING 9031.ENSGALP00000016708
Ensembl ENSGALT00000016727
GeneID 771227
KEGG gga:771227
CTD 2961
eggNOG NOG284684
GeneTree ENSGT00390000011749
HOGENOM HOG000008149
HOVERGEN HBG009400
KO K03137
OMA LGDQIIF
OrthoDB EOG71ZP2B
PhylomeDB Q5ZIE1
TreeFam TF105901
Reactome REACT_234767
REACT_235132
REACT_252292
REACT_260049
REACT_261724
NextBio 20921431
PRO PR:Q5ZIE1
Proteomes UP000000539
GO GO:0005737
GO:0005673
GO:0044822
GO:0006367
Gene3D 1.10.10.10
InterPro IPR016656
IPR003166
IPR011991
Pfam PF02186
PIRSF PIRSF016398
PROSITE PS51351

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0006367

transcription initiation from RNA polymerase II promoter

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000295707
WB:WBGene00010054

P

Seeded From UniProt

complete

part_of

GO:0005673

transcription factor TFIIE complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015829
PANTHER:PTN000295707
PomBase:SPCC1672.08c
SGD:S000001770
WB:WBGene00010054

C

Seeded From UniProt

complete

contributes_to

GO:0001097

TFIIH-class transcription factor complex binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000295707
SGD:S000001770

F

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

C

Seeded From UniProt

complete

enables

GO:0016251

RNA polymerase II general transcription initiation factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

C

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29084
ensembl:ENSP00000348168

C

Seeded From UniProt

complete

part_of

GO:0005673

transcription factor TFIIE complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR016656

C

Seeded From UniProt

complete

involved_in

GO:0006367

transcription initiation from RNA polymerase II promoter

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003166
InterPro:IPR016656

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005673

transcription factor TFIIE complex

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000168461

C

Seeded From UniProt

complete

involved_in

GO:0006367

transcription initiation from RNA polymerase II promoter

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000168461

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000168461

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page