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CHICK:Q5F473

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) NUP50 (ECO:0000313 with Ensembl:ENSGALP00000022956)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAH65061.1, ECO:0000313 with Ensembl:ENSGALP00000022956)
External Links
UniProt Q5F473
EMBL AADN03000364
AJ851427
RefSeq NP_001012559.1
UniGene Gga.16654
SMR Q5F473
STRING 9031.ENSGALP00000022956
Ensembl ENSGALT00000022998
GeneID 418240
KEGG gga:418240
CTD 10762
eggNOG NOG255247
GeneTree ENSGT00440000035348
HOGENOM HOG000007919
HOVERGEN HBG052697
KO K14295
OMA ANIEQQH
OrthoDB EOG7CRTR9
PhylomeDB Q5F473
TreeFam TF106504
Reactome REACT_197925
REACT_270829
NextBio 20821439
PRO PR:Q5F473
Proteomes UP000000539
GO GO:0031965
GO:0005643
GO:0046907
Gene3D 2.30.29.30
InterPro IPR015007
IPR011993
IPR000156
Pfam PF08911
PF00638
SMART SM00160
PROSITE PS50196

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0008536

Ran GTPase binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
SGD:S000002409
SGD:S000004327
UniProtKB:P49792
UniProtKB:Q9H6Z4

F

Seeded From UniProt

complete

involved_in

GO:0006606

protein import into nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0033264
PANTHER:PTN000992429

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96269
PANTHER:PTN000566604
RGD:1310521
SGD:S000002409
UniProtKB:P43487

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351502
PANTHER:PTN000566604
PomBase:SPCC18B5.07c
RGD:1560047
RGD:3191
UniProtKB:P49792
WB:WBGene00003795

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351502
PANTHER:PTN000566604
PomBase:SPCC18B5.07c
RGD:1560047
RGD:3191
SGD:S000001325
UniProtKB:P49792
WB:WBGene00003795

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
PomBase:SPBC365.13c
RGD:1310521
SGD:S000001325
SGD:S000002409
TAIR:locus:2018204
UniProtKB:Q9H6Z4

C

Seeded From UniProt

complete

contributes_to

GO:0005096

GTPase activator activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
PomBase:SPBC1773.07c

F

Seeded From UniProt

complete

involved_in

GO:0043547

positive regulation of GTPase activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0005096

P

Seeded From UniProt

complete

part_of

GO:0043231

intracellular membrane-bounded organelle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9UKX7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0031965

nuclear membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9UKX7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9UKX7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0043231

intracellular membrane-bounded organelle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R4X7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0031965

nuclear membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R4X7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A024R4X7
ensembl:ENSP00000345895

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015007

C

Seeded From UniProt

complete

involved_in

GO:0046907

intracellular transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000156

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page