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CHICK:PRPF3

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PRPF3
Protein Name(s) U4/U6 small nuclear ribonucleoprotein Prp3

Pre-mRNA-splicing factor 3

External Links
UniProt Q5ZJ85
EMBL AJ720549
RefSeq NP_001026561.1
UniGene Gga.1509
ProteinModelPortal Q5ZJ85
SMR Q5ZJ85
PaxDb Q5ZJ85
GeneID 426667
KEGG gga:426667
CTD 9129
eggNOG NOG331230
HOGENOM HOG000205412
HOVERGEN HBG053699
InParanoid Q5ZJ85
KO K12843
PhylomeDB Q5ZJ85
NextBio 20828140
PRO PR:Q5ZJ85
Proteomes UP000000539
GO GO:0016607
GO:0005634
GO:0005681
GO:0046540
GO:0000244
Gene3D 1.20.1390.10
InterPro IPR010541
IPR013881
IPR027104
IPR002483
PANTHER PTHR14212
Pfam PF06544
PF08572
PF01480
SMART SM00311
SUPFAM SSF101233
PROSITE PS51025

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0046540

U4/U6 x U5 tri-snRNP complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43395

C

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43395

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43395

C

Seeded From UniProt

complete

involved_in

GO:0000244

spliceosomal tri-snRNP complex assembly

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:O43395

P

Seeded From UniProt

complete

part_of

GO:0046540

U4/U6 x U5 tri-snRNP complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000368237
PomBase:SPAC29E6.02
SGD:S000002881

C

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000368237
UniProtKB:O43395

P

Seeded From UniProt

complete

involved_in

GO:0000398

mRNA splicing, via spliceosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027104

P

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002483
InterPro:IPR036483

P

Seeded From UniProt

complete

part_of

GO:0046540

U4/U6 x U5 tri-snRNP complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027104

C

Seeded From UniProt

complete

part_of

GO:0005681

spliceosomal complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0747

C

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0186

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page