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CHICK:PRPF3
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | PRPF3 | |
Protein Name(s) | U4/U6 small nuclear ribonucleoprotein Prp3
Pre-mRNA-splicing factor 3 | |
External Links | ||
UniProt | Q5ZJ85 | |
EMBL | AJ720549 | |
RefSeq | NP_001026561.1 | |
UniGene | Gga.1509 | |
ProteinModelPortal | Q5ZJ85 | |
SMR | Q5ZJ85 | |
PaxDb | Q5ZJ85 | |
GeneID | 426667 | |
KEGG | gga:426667 | |
CTD | 9129 | |
eggNOG | NOG331230 | |
HOGENOM | HOG000205412 | |
HOVERGEN | HBG053699 | |
InParanoid | Q5ZJ85 | |
KO | K12843 | |
PhylomeDB | Q5ZJ85 | |
NextBio | 20828140 | |
PRO | PR:Q5ZJ85 | |
Proteomes | UP000000539 | |
GO | GO:0016607 GO:0005634 GO:0005681 GO:0046540 GO:0000244 | |
Gene3D | 1.20.1390.10 | |
InterPro | IPR010541 IPR013881 IPR027104 IPR002483 | |
PANTHER | PTHR14212 | |
Pfam | PF06544 PF08572 PF01480 | |
SMART | SM00311 | |
SUPFAM | SSF101233 | |
PROSITE | PS51025 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0046540 |
U4/U6 x U5 tri-snRNP complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000244 |
spliceosomal tri-snRNP complex assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0046540 |
U4/U6 x U5 tri-snRNP complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000368237 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000368237 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000398 |
mRNA splicing, via spliceosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0046540 |
U4/U6 x U5 tri-snRNP complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005681 |
spliceosomal complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016607 |
nuclear speck |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page