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CHICK:PLOD1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PLOD1 (synonyms: PLOD)
Protein Name(s) Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1

Lysyl hydroxylase 1 LH1

External Links
UniProt P24802
EMBL M59183
PIR A23742
RefSeq NP_001005618.1
UniGene Gga.4726
ProteinModelPortal P24802
STRING 9031.ENSGALP00000007204
PaxDb P24802
GeneID 419485
KEGG gga:419485
CTD 5351
eggNOG NOG311199
HOGENOM HOG000231099
HOVERGEN HBG053618
InParanoid P24802
KO K00473
PhylomeDB P24802
NextBio 20822534
PRO PR:P24802
Proteomes UP000000539
GO GO:0030867
GO:0005506
GO:0031418
GO:0008475
InterPro IPR029044
IPR005123
IPR006620
IPR001006
Pfam PF03171
SMART SM00702
SUPFAM SSF53448
PROSITE PS51471
PS01325

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0008475

procollagen-lysine 5-dioxygenase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q02809

F

Seeded From UniProt

complete

involved_in

GO:0017185

peptidyl-lysine hydroxylation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q02809

P

Seeded From UniProt

complete

involved_in

GO:0046947

hydroxylysine biosynthetic process

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000842962
UniProtKB:O00469
UniProtKB:O60568
UniProtKB:Q02809

P

Seeded From UniProt

complete

involved_in

GO:0032963

collagen metabolic process

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347008
PANTHER:PTN000842962

P

Seeded From UniProt

complete

involved_in

GO:0030199

collagen fibril organization

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347008
PANTHER:PTN000842962

P

Seeded From UniProt

complete

involved_in

GO:0017185

peptidyl-lysine hydroxylation

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347008
PANTHER:PTN000842962
RGD:621382
UniProtKB:O00469
UniProtKB:O60568
UniProtKB:Q02809

P

Seeded From UniProt

complete

enables

GO:0008475

procollagen-lysine 5-dioxygenase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347008
PANTHER:PTN000842962
RGD:621382
UniProtKB:O00469
UniProtKB:O60568
UniProtKB:Q02809
ZFIN:ZDB-GENE-070326-1

F

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006620

F

Seeded From UniProt

complete

enables

GO:0008475

procollagen-lysine 5-dioxygenase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001006

F

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005123

F

Seeded From UniProt

complete

enables

GO:0016705

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006620

F

Seeded From UniProt

complete

enables

GO:0031418

L-ascorbic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006620

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001006
InterPro:IPR005123
InterPro:IPR006620

P

Seeded From UniProt

complete

enables

GO:0008475

procollagen-lysine 5-dioxygenase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.14.11.4

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0031418

L-ascorbic acid binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0847

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

enables

GO:0051213

dioxygenase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0223

F

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0256

C

Seeded From UniProt

complete

part_of

GO:0030867

rough endoplasmic reticulum membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0237

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page