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CHICK:PITX1
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | PITX1 (synonyms: PTX1) | |
| Protein Name(s) | Pituitary homeobox 1
Homeobox protein PITX1 Paired-like homeodomain transcription factor 1 cPTX1 | |
| External Links | ||
| UniProt | P56673 | |
| EMBL | AF069397 | |
| UniGene | Gga.962 | |
| ProteinModelPortal | P56673 | |
| SMR | P56673 | |
| PaxDb | P56673 | |
| Ensembl | ENSGALT00000009427 | |
| eggNOG | NOG249113 | |
| GeneTree | ENSGT00760000118908 | |
| HOGENOM | HOG000273886 | |
| HOVERGEN | HBG068770 | |
| InParanoid | P56673 | |
| PhylomeDB | P56673 | |
| PRO | PR:P56673 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | P56673 | |
| GO | GO:0005634 GO:0043565 GO:0003700 GO:0007275 GO:0006351 | |
| Gene3D | 1.10.10.60 | |
| InterPro | IPR017970 IPR001356 IPR016233 IPR009057 IPR003654 | |
| Pfam | PF00046 PF03826 | |
| PIRSF | PIRSF000563 | |
| SMART | SM00389 | |
| SUPFAM | SSF46689 | |
| PROSITE | PS00027 PS50071 PS50803 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109340 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009653 |
anatomical structure morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:109340 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0020912 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001085 |
RNA polymerase II transcription factor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001551528 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:107374 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ibrahim, DM et al. (2013) Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations. Genome Res. 23 2091-102 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page