GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:PER2
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | PER2 | |
Protein Name(s) | Period circadian protein homolog 2
cPER2 Circadian clock protein PERIOD 2 | |
External Links | ||
UniProt | Q8QGQ8 | |
EMBL | AF246956 | |
RefSeq | NP_989593.1 | |
UniGene | Gga.39390 | |
ProteinModelPortal | Q8QGQ8 | |
PaxDb | Q8QGQ8 | |
PRIDE | Q8QGQ8 | |
GeneID | 374116 | |
KEGG | gga:374116 | |
CTD | 8864 | |
eggNOG | NOG253593 | |
HOGENOM | HOG000231111 | |
HOVERGEN | HBG008167 | |
InParanoid | Q8QGQ8 | |
KO | K02633 | |
PhylomeDB | Q8QGQ8 | |
NextBio | 20813632 | |
PRO | PR:Q8QGQ8 | |
Proteomes | UP000000539 | |
GO | GO:0005737 GO:0005634 GO:0004871 GO:0007623 GO:0006355 GO:0006351 | |
InterPro | IPR001610 IPR000014 IPR022728 | |
Pfam | PF12114 | |
SMART | SM00086 SM00091 | |
SUPFAM | SSF55785 | |
PROSITE | PS50112 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043153 |
entrainment of circadian clock by photoperiod |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009416 |
response to light stimulus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1098283 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0001222 |
transcription corepressor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1195265 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000976 |
transcription regulatory region sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1098283 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003068 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048511 |
rhythmic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Haque, R et al. (2010) CLOCK and NPAS2 have overlapping roles in the circadian oscillation of arylalkylamine N-acetyltransferase mRNA in chicken cone photoreceptors. J. Neurochem. 113 1296-306 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
m
n
t