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CHICK:PER2

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PER2
Protein Name(s) Period circadian protein homolog 2

cPER2 Circadian clock protein PERIOD 2

External Links
UniProt Q8QGQ8
EMBL AF246956
RefSeq NP_989593.1
UniGene Gga.39390
ProteinModelPortal Q8QGQ8
PaxDb Q8QGQ8
PRIDE Q8QGQ8
GeneID 374116
KEGG gga:374116
CTD 8864
eggNOG NOG253593
HOGENOM HOG000231111
HOVERGEN HBG008167
InParanoid Q8QGQ8
KO K02633
PhylomeDB Q8QGQ8
NextBio 20813632
PRO PR:Q8QGQ8
Proteomes UP000000539
GO GO:0005737
GO:0005634
GO:0004871
GO:0007623
GO:0006355
GO:0006351
InterPro IPR001610
IPR000014
IPR022728
Pfam PF12114
SMART SM00086
SM00091
SUPFAM SSF55785
PROSITE PS50112

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0007623

circadian rhythm

PMID:20345751[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043153

entrainment of circadian clock by photoperiod

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1098283
PANTHER:PTN000138364
ZFIN:ZDB-GENE-011220-2

P

Seeded From UniProt

complete

involved_in

GO:0032922

circadian regulation of gene expression

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1098283
MGI:MGI:1195265
PANTHER:PTN000138364
UniProtKB:O15534
ZFIN:ZDB-GENE-000804-1

P

Seeded From UniProt

complete

involved_in

GO:0009416

response to light stimulus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1098283
PANTHER:PTN000138364
ZFIN:ZDB-GENE-011220-2
ZFIN:ZDB-GENE-040419-1

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1098283
MGI:MGI:1195265
PANTHER:PTN000138364

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1195265
PANTHER:PTN000138364
UniProtKB:O15534
UniProtKB:P56645

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1098283
MGI:MGI:1195265
PANTHER:PTN000138364
RGD:61945
RGD:727863
UniProtKB:O15055
UniProtKB:P56645

C

Seeded From UniProt

complete

enables

GO:0001222

transcription corepressor binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1195265
PANTHER:PTN000138364

F

Seeded From UniProt

complete

enables

GO:0000976

transcription regulatory region sequence-specific DNA binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1098283
MGI:MGI:1195265
PANTHER:PTN000138364

F

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003068
MGI:MGI:1098283
MGI:MGI:1195265
MGI:MGI:1277134
PANTHER:PTN000138364
RGD:61945
UniProtKB:P56645

P

Seeded From UniProt

complete

involved_in

GO:0048511

rhythmic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0090

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Haque, R et al. (2010) CLOCK and NPAS2 have overlapping roles in the circadian oscillation of arylalkylamine N-acetyltransferase mRNA in chicken cone photoreceptors. J. Neurochem. 113 1296-306 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page