GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:PDLI4
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | PDLIM4 (synonyms: RIL) | |
| Protein Name(s) | PDZ and LIM domain protein 4
LIM protein RIL Reversion-induced LIM protein | |
| External Links | ||
| UniProt | Q9PW72 | |
| EMBL | AF167295 | |
| RefSeq | NP_990170.1 | |
| UniGene | Gga.7467 | |
| ProteinModelPortal | Q9PW72 | |
| SMR | Q9PW72 | |
| PaxDb | Q9PW72 | |
| Ensembl | ENSGALT00000043888 | |
| GeneID | 395643 | |
| KEGG | gga:395643 | |
| CTD | 8572 | |
| eggNOG | NOG297766 | |
| GeneTree | ENSGT00590000082980 | |
| HOGENOM | HOG000290704 | |
| HOVERGEN | HBG061371 | |
| InParanoid | Q9PW72 | |
| OMA | HIDPEAQ | |
| PhylomeDB | Q9PW72 | |
| TreeFam | TF106408 | |
| NextBio | 20815716 | |
| PRO | PR:Q9PW72 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | Q9PW72 | |
| GO | GO:0008270 | |
| Gene3D | 2.10.110.10 2.30.42.10 | |
| InterPro | IPR001478 IPR001781 | |
| Pfam | PF00412 PF00595 | |
| SMART | SM00132 SM00228 | |
| SUPFAM | SSF50156 | |
| PROSITE | PS00478 PS50023 PS50106 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0098976 |
excitatory chemical synaptic transmission |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0034777 |
recycling endosome lumen |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031905 |
early endosome lumen |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043197 |
dendritic spine |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060173 |
limb development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051015 |
actin filament binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051393 |
alpha-actinin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031941 |
filamentous actin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0031532 |
actin cytoskeleton reorganization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0030027 |
lamellipodium |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0019903 |
protein phosphatase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0001725 |
stress fiber |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P50479 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0019903 |
protein phosphatase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70271 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043005 |
neuron projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031901 |
early endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030027 |
lamellipodium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0055038 |
recycling endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Krause, A et al. (2004) Tbx5 and Tbx4 transcription factors interact with a new chicken PDZ-LIM protein in limb and heart development. Dev. Biol. 273 106-20 PubMed GONUTS page
c
e
p
