GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:O93417

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) CASP3 (ECO:0000313 with Ensembl:ENSGALP00000017288)
Protein Name(s) Caspase-3 (ECO:0000313 with EMBL:AAC32602.1)

Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000017288)

External Links
UniProt O93417
EMBL AADN03004284
AF083029
RefSeq NP_990056.1
UniGene Gga.4346
SMR O93417
STRING 9031.ENSGALP00000017288
MEROPS C14.003
Ensembl ENSGALT00000017308
ENSGALT00000045406
GeneID 395476
KEGG gga:395476
CTD 836
eggNOG NOG279444
GeneTree ENSGT00760000118912
HOGENOM HOG000231878
HOVERGEN HBG050802
KO K02187
OMA DDDMACH
OrthoDB EOG7TTQ7K
PhylomeDB O93417
TreeFam TF102023
BRENDA 3.4.22.56
Reactome REACT_197190
REACT_198104
REACT_238229
REACT_247193
REACT_252606
REACT_252902
REACT_255689
REACT_261923
REACT_263800
NextBio 20815557
PRO PR:O93417
Proteomes UP000000539
GO GO:0005737
GO:0005829
GO:0005634
GO:0004190
GO:0004861
GO:0004197
GO:0097200
GO:0001782
GO:0045165
GO:0006974
GO:0071310
GO:0030218
GO:0097194
GO:0097192
GO:0008625
GO:0034349
GO:0007507
GO:0008631
GO:0030216
GO:0046007
GO:0043066
GO:0030889
GO:0045736
GO:0051402
GO:0030182
GO:0043525
GO:0016485
GO:1902510
GO:0001836
GO:0009411
GO:0009611
GO:0007605
GO:0043029
Gene3D 3.40.50.1460
InterPro IPR029030
IPR015470
IPR011600
IPR001309
IPR016129
IPR002138
IPR015917
PANTHER PTHR10454:SF30
Pfam PF00656
PRINTS PR00376
SMART SM00115
PROSITE PS01122
PS01121
PS50207
PS50208

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0008234

cysteine-type peptidase activity

PMID:11953316[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005623

cell

PMID:25183873[2]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0006783)

Seeded From UniProt

complete

involved_in

GO:0098586

cellular response to virus

PMID:21723579[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0097153

cysteine-type endopeptidase activity involved in apoptotic process

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0019972
MGI:MGI:107739
MGI:MGI:109383
MGI:MGI:1261423
MGI:MGI:97295
PANTHER:PTN000047947
UniProtKB:P42574
UniProtKB:Q14790

F

Seeded From UniProt

complete

involved_in

GO:0030218

erythrocyte differentiation

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000048337
UniProtKB:P42574

P

Seeded From UniProt

complete

involved_in

GO:0030216

keratinocyte differentiation

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107739
PANTHER:PTN000048337

P

Seeded From UniProt

complete

involved_in

GO:0030182

neuron differentiation

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000048337
RGD:2275

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0010501
FB:FBgn0020381
FB:FBgn0026404
FB:FBgn0028381
FB:FBgn0033659
MGI:MGI:107739
MGI:MGI:109383
MGI:MGI:1261423
MGI:MGI:1277950
MGI:MGI:1312922
PANTHER:PTN000047947
RGD:2274
RGD:2275
RGD:61867
RGD:620945
RGD:69274
UniProtKB:O15519
UniProtKB:P42574
UniProtKB:P55210
UniProtKB:P55211
UniProtKB:Q14790
WB:WBGene00000417

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0019972
FB:FBgn0020381
FB:FBgn0026404
FB:FBgn0028381
FB:FBgn0033051
MGI:MGI:107739
MGI:MGI:1261423
MGI:MGI:1336166
MGI:MGI:97295
PANTHER:PTN000047947
RGD:2274
RGD:2275
RGD:61867
RGD:620945
RGD:70967
UniProtKB:O15519
UniProtKB:P31944
UniProtKB:Q95ND5
UniProtKB:Q9ULZ3
WB:WBGene00000417

C

Seeded From UniProt

complete

enables

GO:0004197

cysteine-type endopeptidase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001309
InterPro:IPR002138
InterPro:IPR002398

F

Seeded From UniProt

complete

involved_in

GO:0006508

proteolysis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001309
InterPro:IPR002138
InterPro:IPR002398

P

Seeded From UniProt

complete

enables

GO:0008234

cysteine-type peptidase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015917

F

Seeded From UniProt

complete

involved_in

GO:0006508

proteolysis

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0645

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

enables

GO:0008233

peptidase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0645

F

Seeded From UniProt

complete

enables

GO:0008234

cysteine-type peptidase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0788

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Ruchaud, S et al. (2002) Caspase-6 gene disruption reveals a requirement for lamin A cleavage in apoptotic chromatin condensation. EMBO J. 21 1967-77 PubMed GONUTS page
  2. Watanabe, Y et al. (2014) NRP1-mediated Sema3A signals coordinate laminar formation in the developing chick optic tectum. Development 141 3572-82 PubMed GONUTS page
  3. Wei, L et al. (2011) Infectious bursal disease virus activates the phosphatidylinositol 3-kinase (PI3K)/Akt signaling pathway by interaction of VP5 protein with the p85α subunit of PI3K. Virology 417 211-20 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 4.4 4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page