CHICK:NFIB

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	NFIB (synonyms: NFI-B)
Protein Name(s)	Nuclear factor 1 B-type NF1-B Nuclear factor 1/B CCAAT-box-binding transcription factor CTF Nuclear factor I/B NF-I/B NFI-B TGGCA-binding protein
External Links
UniProt	P17924
EMBL	X51485 X51484
PIR	S09995
RefSeq	NP_990603.1
UniGene	Gga.709
STRING	9031.ENSGALP00000008721
PaxDb	P17924
GeneID	396209
KEGG	gga:396209
CTD	4781
eggNOG	NOG252172
HOGENOM	HOG000013028
HOVERGEN	HBG006561
InParanoid	P17924
KO	K09169
OrthoDB	EOG7WDN2K
PhylomeDB	P17924
TreeFam	TF313889
NextBio	20816261
PRO	PR:P17924
Proteomes	UP000000539
GO	GO:0044300 GO:0005634 GO:0003677 GO:0000981 GO:0021960 GO:0002062 GO:0060486 GO:0071679 GO:0006260 GO:0010001 GO:0061141 GO:2000795 GO:2000791 GO:0045944 GO:0021740 GO:0006366 GO:0060509 GO:0060510
InterPro	IPR000647 IPR020604 IPR019739 IPR019548 IPR003619
PANTHER	PTHR11492
Pfam	PF00859 PF03165 PF10524
SMART	SM00523
PROSITE	PS00349 PS51080

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:2000795	negative regulation of epithelial cell proliferation involved in lung morphogenesis	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:2000791	negative regulation of mesenchymal cell proliferation involved in lung development	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0071679	commissural neuron axon guidance	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0061141	lung ciliated cell differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0060510	type II pneumocyte differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0060509	type I pneumocyte differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0060486	Clara cell differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O00712	P	Seeded From UniProt	complete
part_of	GO:0044300	cerebellar mossy fiber	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	C	Seeded From UniProt	complete
involved_in	GO:0021960	anterior commissure morphogenesis	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0021740	principal sensory nucleus of trigeminal nerve development	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
involved_in	GO:0010001	glial cell differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O00712	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O00712	F	Seeded From UniProt	complete
involved_in	GO:0002062	chondrocyte differentiation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P97863	P	Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O00712	F	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:103188 MGI:MGI:108056 MGI:MGI:109591 MGI:MGI:97311 PANTHER:PTN000896695 UniProtKB:O00712 UniProtKB:P08651 UniProtKB:Q12857 UniProtKB:Q14938 WB:WBGene00003592	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:103188 MGI:MGI:108056 PANTHER:PTN000896695 RGD:3170 RGD:62016 UniProtKB:O00712 UniProtKB:P08651 UniProtKB:Q12857	C	Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000896695 UniProtKB:O00712	F	Seeded From UniProt	complete
involved_in	GO:0000122	negative regulation of transcription by RNA polymerase II	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:109591 MGI:MGI:97311 PANTHER:PTN000896695 UniProtKB:O00712 UniProtKB:P08651 UniProtKB:Q14938	P	Seeded From UniProt	complete
involved_in	GO:1902894	negative regulation of pri-miRNA transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	P	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	F	Seeded From UniProt	complete
part_of	GO:0001650	fibrillar center	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	C	Seeded From UniProt	complete
enables	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	F	Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	F	Seeded From UniProt	complete
enables	GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O00712 ensembl:ENSP00000370340	F	Seeded From UniProt	complete
involved_in	GO:2000795	negative regulation of epithelial cell proliferation involved in lung morphogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:2000791	negative regulation of mesenchymal cell proliferation involved in lung development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0071679	commissural neuron axon guidance	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0061141	lung ciliated cell differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0060689	cell differentiation involved in salivary gland development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0060662	salivary gland cavitation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0060510	type II pneumocyte differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0060509	type I pneumocyte differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0060486	Clara cell differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
part_of	GO:0044300	cerebellar mossy fiber	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	C	Seeded From UniProt	complete
involved_in	GO:0030902	hindbrain development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0030900	forebrain development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0030324	lung development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0021960	anterior commissure morphogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0021740	principal sensory nucleus of trigeminal nerve development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0010001	glial cell differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0009617	response to bacterium	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
involved_in	GO:0008285	negative regulation of cell population proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	C	Seeded From UniProt	complete
involved_in	GO:0002062	chondrocyte differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	P	Seeded From UniProt	complete
enables	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P97863 ensembl:ENSMUSP00000052863	F	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000647 InterPro:IPR020604	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000647 InterPro:IPR020604	C	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000647 InterPro:IPR003619 InterPro:IPR020604	P	Seeded From UniProt	complete
involved_in	GO:0006260	DNA replication	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0235	P	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 ^1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:NFIB

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