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CHICK:HIF1A

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HIF1A
Protein Name(s) Hypoxia-inducible factor 1-alpha

HIF-1-alpha HIF1-alpha

External Links
UniProt Q9YIB9
EMBL AB013746
PIR JC7619
RefSeq NP_989628.1
UniGene Gga.4933
ProteinModelPortal Q9YIB9
SMR Q9YIB9
STRING 9031.ENSGALP00000036587
PaxDb Q9YIB9
PRIDE Q9YIB9
GeneID 374177
KEGG gga:374177
CTD 3091
eggNOG NOG289264
HOGENOM HOG000234306
HOVERGEN HBG060456
InParanoid Q9YIB9
KO K08268
PhylomeDB Q9YIB9
NextBio 20813683
PRO PR:Q9YIB9
Proteomes UP000000539
GO GO:0005737
GO:0016607
GO:0005634
GO:0003677
GO:0035035
GO:0003700
GO:0004871
GO:0045893
GO:0001666
GO:0006351
InterPro IPR011598
IPR001321
IPR014887
IPR021537
IPR001610
IPR000014
IPR013767
Pfam PF11413
PF08778
PF00989
PRINTS PR01080
SMART SM00353
SM00086
SM00091
SUPFAM SSF47459
SSF55785
TIGRFAMs TIGR00229
PROSITE PS50888
PS50112

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0016607

nuclear speck

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q61221

C

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16665

P

Seeded From UniProt

complete

enables

GO:0035035

histone acetyltransferase binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16665

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16665

C

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16665

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0039411
FB:FBgn0262139
FB:FBgn0266411
MGI:MGI:106918
MGI:MGI:109169
MGI:MGI:2664186
PANTHER:PTN001127032
RGD:61928
RGD:68404
RGD:70332
UniProtKB:Q16665
UniProtKB:Q8IUM7
UniProtKB:Q99814
WB:WBGene00000521
WB:WBGene00001851

P

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0039411
PANTHER:PTN000548738
UniProtKB:Q9Y2N7

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004666
FB:FBgn0039411
FB:FBgn0262139
FB:FBgn0266411
MGI:MGI:106918
MGI:MGI:109169
MGI:MGI:109205
MGI:MGI:1351610
MGI:MGI:1859778
MGI:MGI:2664186
MGI:MGI:98306
MGI:MGI:98307
PANTHER:PTN000548738
RGD:61928
RGD:68404
RGD:70332
UniProtKB:Q16665
UniProtKB:Q9XTA5
WB:WBGene00001851

C

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106918
MGI:MGI:2664186
PANTHER:PTN000548738
UniProtKB:Q8IUM7

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001321
InterPro:IPR013767

P

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011598
InterPro:IPR036638

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0186

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page