CHICK:FANCJ

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	BRIP1 (synonyms: FANCJ)
Protein Name(s)	Fanconi anemia group J protein homolog Protein FACJ ATP-dependent RNA helicase BRIP1
External Links
UniProt	Q3YK19
EMBL	DQ109581
RefSeq	NP_001028230.1
UniGene	Gga.17801
ProteinModelPortal	Q3YK19
STRING	9031.ENSGALP00000038436
PaxDb	Q3YK19
Ensembl	ENSGALT00000039225
GeneID	417642
KEGG	gga:417642
CTD	83990
eggNOG	COG1199
GeneTree	ENSGT00530000063199
HOGENOM	HOG000068083
HOVERGEN	HBG081519
InParanoid	Q3YK19
KO	K15362
OMA	TNNDMNQ
OrthoDB	EOG7PS1GJ
PhylomeDB	Q3YK19
TreeFam	TF329449
Reactome	REACT_115836 REACT_285495
NextBio	20820915
PRO	PR:Q3YK19
Proteomes	UP000000539
GO	GO:0005737 GO:0031965 GO:0005654 GO:0051539 GO:0005524 GO:0004003 GO:0003677 GO:0046872 GO:0006281 GO:0006357
Gene3D	3.40.50.300
InterPro	IPR006555 IPR010614 IPR013020 IPR014013 IPR006554 IPR027417
Pfam	PF06733 PF13307
SMART	SM00488 SM00491
SUPFAM	SSF52540
TIGRFAMs	TIGR00604
PROSITE	PS51193

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:1990918	double-strand break repair involved in meiotic recombination	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:2442836 PANTHER:PTN000158307	P	Seeded From UniProt	complete
involved_in	GO:0006289	nucleotide-excision repair	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000158307 WB:WBGene00001049	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000158307 UniProtKB:A0A0G2K475 UniProtKB:Q9BX63	C	Seeded From UniProt	complete
enables	GO:0004003	ATP-dependent DNA helicase activity	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	EcoGene:EG11357 MGI:MGI:2139369 PANTHER:PTN002607489 UniProtKB:Q96FC9 UniProtKB:Q9NZ71	F	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004003	P	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0003678	P	Seeded From UniProt	complete
involved_in	GO:0032508	DNA duplex unwinding	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004003	P	Seeded From UniProt	complete
involved_in	GO:1990918	double-strand break repair involved in meiotic recombination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0072520	seminiferous tubule development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0051026	chiasma assembly	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0010705	meiotic DNA double-strand break processing involved in reciprocal meiotic recombination	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0008584	male gonad development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0007286	spermatid development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0007284	spermatogonial cell division	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0007283	spermatogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
involved_in	GO:0007129	synapsis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q5SXJ3 ensembl:ENSMUSP00000043108	P	Seeded From UniProt	complete
part_of	GO:0031965	nuclear membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9BX63 ensembl:ENSP00000259008	C	Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9BX63 ensembl:ENSP00000259008	P	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9BX63 ensembl:ENSP00000259008	C	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9BX63 ensembl:ENSP00000259008	C	Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006555	F	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR010614	F	Seeded From UniProt	complete
enables	GO:0004003	ATP-dependent DNA helicase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006554 InterPro:IPR010614 InterPro:IPR013020	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013	F	Seeded From UniProt	complete
involved_in	GO:0006139	nucleobase-containing compound metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006555	P	Seeded From UniProt	complete
enables	GO:0008026	ATP-dependent helicase activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006555	F	Seeded From UniProt	complete
enables	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR006554 InterPro:IPR006555	F	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	Reactome:R-GGA-351465	ECO:0000304	author statement supported by traceable reference used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	Reactome:R-GGA-265894	ECO:0000304	author statement supported by traceable reference used in manual assertion		C	Seeded From UniProt	complete
enables	GO:0003678	DNA helicase activity	Reactome:R-GGA-265894	ECO:0000304	author statement supported by traceable reference used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F	Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F	Seeded From UniProt	complete
involved_in	GO:0006974	cellular response to DNA damage stimulus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0227	P	Seeded From UniProt	complete
enables	GO:0051536	iron-sulfur cluster binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0411	F	Seeded From UniProt	complete
enables	GO:0000166	nucleotide binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0547	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
involved_in	GO:0006281	DNA repair	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0234	P	Seeded From UniProt	complete
enables	GO:0051539	4 iron, 4 sulfur cluster binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0004	F	Seeded From UniProt	complete
enables	GO:0005524	ATP binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0067	F	Seeded From UniProt	complete
enables	GO:0004386	helicase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0347	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 ^1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:FANCJ

Contents

Annotations

Notes

References

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