GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:F172A
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | FAM172A | |
| Protein Name(s) | Protein FAM172A | |
| External Links | ||
| UniProt | Q5ZK44 | |
| EMBL | AJ720240 | |
| RefSeq | NP_001006574.1 | |
| UniGene | Gga.2141 | |
| PaxDb | Q5ZK44 | |
| Ensembl | ENSGALT00000023631 ENSGALT00000037675 | |
| GeneID | 427109 | |
| KEGG | gga:427109 | |
| CTD | 83989 | |
| eggNOG | NOG263064 | |
| GeneTree | ENSGT00530000063907 | |
| HOGENOM | HOG000046503 | |
| HOVERGEN | HBG107877 | |
| InParanoid | Q5ZK44 | |
| OMA | PNENYLE | |
| PhylomeDB | Q5ZK44 | |
| NextBio | 20828426 | |
| PRO | PR:Q5ZK44 | |
| Proteomes | UP000000539 | |
| GO | GO:0005783 GO:0005576 | |
| Gene3D | 3.40.50.1820 | |
| InterPro | IPR029058 IPR019154 | |
| Pfam | PF09757 | |
| SUPFAM | SSF53474 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
contributes_to |
GO:0035197 |
siRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001085504 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0031048 |
chromatin silencing by small RNA |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001085504 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1915925 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page