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CHICK:F172A

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) FAM172A
Protein Name(s) Protein FAM172A
External Links
UniProt Q5ZK44
EMBL AJ720240
RefSeq NP_001006574.1
UniGene Gga.2141
PaxDb Q5ZK44
Ensembl ENSGALT00000023631
ENSGALT00000037675
GeneID 427109
KEGG gga:427109
CTD 83989
eggNOG NOG263064
GeneTree ENSGT00530000063907
HOGENOM HOG000046503
HOVERGEN HBG107877
InParanoid Q5ZK44
OMA PNENYLE
PhylomeDB Q5ZK44
NextBio 20828426
PRO PR:Q5ZK44
Proteomes UP000000539
GO GO:0005783
GO:0005576
Gene3D 3.40.50.1820
InterPro IPR029058
IPR019154
Pfam PF09757
SUPFAM SSF53474

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005737

cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q3TNH5

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q3TNH5

C

Seeded From UniProt

complete

contributes_to

GO:0035197

siRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001085504
PomBase:SPAC13G7.07

F

Seeded From UniProt

complete

involved_in

GO:0031048

chromatin silencing by small RNA

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001085504
PomBase:SPAC13G7.07

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1915925
PANTHER:PTN001085504

C

Seeded From UniProt

complete

involved_in

GO:0000381

regulation of alternative mRNA splicing, via spliceosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039929

P

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page