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CHICK:DNM3A
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | DNMT3A | |
| Protein Name(s) | DNA (cytosine-5)-methyltransferase 3A
Dnmt3a | |
| External Links | ||
| UniProt | Q4W5Z4 | |
| EMBL | AB214886 | |
| RefSeq | NP_001020003.1 | |
| UniGene | Gga.6002 | |
| ProteinModelPortal | Q4W5Z4 | |
| SMR | Q4W5Z4 | |
| STRING | 9031.ENSGALP00000006352 | |
| REBASE | 11753 | |
| PaxDb | Q4W5Z4 | |
| GeneID | 421991 | |
| KEGG | gga:421991 | |
| CTD | 1788 | |
| eggNOG | NOG70699 | |
| HOVERGEN | HBG051381 | |
| InParanoid | Q4W5Z4 | |
| KO | K17398 | |
| PhylomeDB | Q4W5Z4 | |
| NextBio | 20824684 | |
| PRO | PR:Q4W5Z4 | |
| Proteomes | UP000000539 | |
| GO | GO:0005737 GO:0000791 GO:0016363 GO:0005634 GO:0003886 GO:0003677 GO:0046872 GO:0090116 GO:0016568 GO:0006306 GO:0006355 GO:0006351 | |
| Gene3D | 3.40.50.150 | |
| InterPro | IPR025766 IPR018117 IPR001525 IPR030487 IPR000313 IPR029063 | |
| PANTHER | PTHR23068:SF10 | |
| Pfam | PF00855 | |
| SMART | SM00293 | |
| SUPFAM | SSF53335 | |
| PROSITE | PS51533 PS00094 PS50812 PS51679 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0001046 |
core promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_in:(UBERON:0001928) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009408 |
response to heat |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
occurs_in:(UBERON:0001928) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0010328) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0071774 |
response to fibroblast growth factor |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
occurs_in:(UBERON:0010328) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0016363 |
nuclear matrix |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0000791 |
euchromatin |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0090116 |
C-5 methylation of cytosine |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003886 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006306 |
DNA methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0009008 |
DNA-methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003886 |
DNA (cytosine-5-)-methyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Yossifoff, M et al. (2008) Dynamic changes in DNA methylation during thermal control establishment affect CREB binding to the brain-derived neurotrophic factor promoter. Eur. J. Neurosci. 28 2267-77 PubMed GONUTS page
- ↑ 2.0 2.1 Kumar, D & Lassar, AB (2014) Fibroblast growth factor maintains chondrogenic potential of limb bud mesenchymal cells by modulating DNMT3A recruitment. Cell Rep 8 1419-31 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 3.6 Chen, T et al. (2002) A novel Dnmt3a isoform produced from an alternative promoter localizes to euchromatin and its expression correlates with active de novo methylation. J. Biol. Chem. 277 38746-54 PubMed GONUTS page
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