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CHICK:DDB1

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) DDB1
Protein Name(s) DNA damage-binding protein 1

DDB p127 subunit Damage-specific DNA-binding protein 1 UV-damaged DNA-binding factor

External Links
UniProt Q805F9
EMBL AB074298
AJ719779
RefSeq NP_989547.1
UniGene Gga.12977
STRING 9031.ENSGALP00000039807
PaxDb Q805F9
PRIDE Q805F9
GeneID 374050
KEGG gga:374050
CTD 1642
eggNOG NOG247734
HOGENOM HOG000007241
HOVERGEN HBG005460
InParanoid Q805F9
KO K10610
PhylomeDB Q805F9
Reactome REACT_115867
UniPathway UPA00143
NextBio 20813572
PRO PR:Q805F9
Proteomes UP000000539
GO GO:0080008
GO:0031464
GO:0031465
GO:0005737
GO:0005654
GO:0005634
GO:0003677
GO:0006281
GO:0043161
GO:0016567
Gene3D 2.130.10.10
InterPro IPR004871
IPR031297
IPR011047
IPR015943
PANTHER PTHR10644:SF3
Pfam PF03178
SUPFAM SSF50998

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0080008

Cul4-RING E3 ubiquitin ligase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

C

Seeded From UniProt

complete

involved_in

GO:0043161

proteasome-mediated ubiquitin-dependent protein catabolic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

P

Seeded From UniProt

complete

part_of

GO:0031465

Cul4B-RING E3 ubiquitin ligase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

C

Seeded From UniProt

complete

part_of

GO:0031464

Cul4A-RING E3 ubiquitin ligase complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q16531

C

Seeded From UniProt

complete

involved_in

GO:0043161

proteasome-mediated ubiquitin-dependent protein catabolic process

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000068363
PomBase:SPAC17H9.10c
UniProtKB:Q16531
WB:WBGene00010890

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000068362
PomBase:SPAC17H9.10c
PomBase:SPAPJ698.03c
TAIR:locus:2127368
TAIR:locus:2153122
UniProtKB:A1A4K3
UniProtKB:Q15393
UniProtKB:Q16531
UniProtKB:Q5BFT4
UniProtKB:Q6L4S0
UniProtKB:Q9M0V3
dictyBase:DDB_G0286013

C

Seeded From UniProt

complete

enables

GO:0003684

damaged DNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000068363
RGD:621889
UniProtKB:Q16531
UniProtKB:Q6L4S0

F

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004871

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004871

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031297

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

Reactome:R-GGA-353377

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-GGA-353476

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0016567

protein ubiquitination

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00143

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page