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CHICK:CTDSL
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | NFI1 (synonyms: NIF) | |
| Protein Name(s) | CTD small phosphatase-like protein
CTDSP-like Nuclear LIM interactor-interacting factor 1 NLI-interacting factor 1 Small C-terminal domain phosphatase 3 | |
| External Links | ||
| UniProt | Q9PTJ6 | |
| EMBL | AF189773 AF189774 AF189775 AF189776 | |
| RefSeq | NP_001001316.1 | |
| UniGene | Gga.4190 | |
| ProteinModelPortal | Q9PTJ6 | |
| SMR | Q9PTJ6 | |
| STRING | 9031.ENSGALP00000009144 | |
| Ensembl | ENSGALT00000009158 | |
| GeneID | 408252 | |
| KEGG | gga:408252 | |
| CTD | 10217 | |
| eggNOG | COG5190 | |
| GeneTree | ENSGT00390000017194 | |
| HOGENOM | HOG000236379 | |
| HOVERGEN | HBG053298 | |
| InParanoid | Q9PTJ6 | |
| KO | K15731 | |
| OrthoDB | EOG71P2C3 | |
| PhylomeDB | Q9PTJ6 | |
| TreeFam | TF313556 | |
| NextBio | 20818670 | |
| PRO | PR:Q9PTJ6 | |
| Proteomes | UP000000539 | |
| ExpressionAtlas | Q9PTJ6 | |
| GO | GO:0005634 GO:0046872 GO:0004721 | |
| Gene3D | 3.40.50.1000 | |
| InterPro | IPR011948 IPR023214 IPR004274 | |
| Pfam | PF03031 | |
| SMART | SM00577 | |
| SUPFAM | SSF56784 | |
| TIGRFAMs | TIGR02251 | |
| PROSITE | PS50969 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0008420 |
RNA polymerase II CTD heptapeptide repeat phosphatase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000954535 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004721 |
phosphoprotein phosphatase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1196405 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006470 |
protein dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0008420 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006470 |
protein dephosphorylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004721 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006470 |
protein dephosphorylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008420 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006470 |
protein dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004721 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006470 |
protein dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004721 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016311 |
dephosphorylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0016791 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2000134 |
negative regulation of G1/S transition of mitotic cell cycle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P58465 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001933 |
negative regulation of protein phosphorylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P58465 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008420 |
RNA polymerase II CTD heptapeptide repeat phosphatase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016791 |
phosphatase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004721 |
phosphoprotein phosphatase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004721 |
phosphoprotein phosphatase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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