GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:ATX3
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | ATXN3 (synonyms: MDJ1, MJD) | |
| Protein Name(s) | Ataxin-3
Machado-Joseph disease protein 1 homolog | |
| External Links | ||
| UniProt | Q9W689 | |
| EMBL | AF085247 | |
| RefSeq | NP_989688.1 | |
| UniGene | Gga.44490 | |
| ProteinModelPortal | Q9W689 | |
| SMR | Q9W689 | |
| STRING | 9031.ENSGALP00000017488 | |
| MEROPS | C86.001 | |
| Ensembl | ENSGALT00000017509 | |
| GeneID | 378424 | |
| KEGG | gga:378424 | |
| CTD | 4287 | |
| eggNOG | NOG327234 | |
| GeneTree | ENSGT00390000001830 | |
| HOGENOM | HOG000006034 | |
| HOVERGEN | HBG025648 | |
| InParanoid | Q9W689 | |
| KO | K11863 | |
| OMA | MLQAAMN | |
| OrthoDB | EOG779NZ3 | |
| PhylomeDB | Q9W689 | |
| TreeFam | TF314228 | |
| NextBio | 20813765 | |
| PRO | PR:Q9W689 | |
| Proteomes | UP000000539 | |
| GO | GO:0005759 GO:0031966 GO:0042405 GO:0008242 GO:0031625 GO:0004843 GO:0034605 GO:0071218 GO:0035640 GO:0006515 GO:0035520 GO:0043161 GO:0006355 GO:0006351 | |
| InterPro | IPR006155 IPR003903 | |
| Pfam | PF02099 PF02809 | |
| PRINTS | PR01233 | |
| SMART | SM00726 | |
| PROSITE | PS50957 PS50330 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0071218 |
cellular response to misfolded protein |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0035520 |
monoubiquitinated protein deubiquitination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006515 |
protein quality control for misfolded or incompletely synthesized proteins |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016579 |
protein deubiquitination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000366325 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1099442 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1099442 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016579 |
protein deubiquitination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008234 |
cysteine-type peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
p