GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CHICK:ATX3
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | ATXN3 (synonyms: MDJ1, MJD) | |
Protein Name(s) | Ataxin-3
Machado-Joseph disease protein 1 homolog | |
External Links | ||
UniProt | Q9W689 | |
EMBL | AF085247 | |
RefSeq | NP_989688.1 | |
UniGene | Gga.44490 | |
ProteinModelPortal | Q9W689 | |
SMR | Q9W689 | |
STRING | 9031.ENSGALP00000017488 | |
MEROPS | C86.001 | |
Ensembl | ENSGALT00000017509 | |
GeneID | 378424 | |
KEGG | gga:378424 | |
CTD | 4287 | |
eggNOG | NOG327234 | |
GeneTree | ENSGT00390000001830 | |
HOGENOM | HOG000006034 | |
HOVERGEN | HBG025648 | |
InParanoid | Q9W689 | |
KO | K11863 | |
OMA | MLQAAMN | |
OrthoDB | EOG779NZ3 | |
PhylomeDB | Q9W689 | |
TreeFam | TF314228 | |
NextBio | 20813765 | |
PRO | PR:Q9W689 | |
Proteomes | UP000000539 | |
GO | GO:0005759 GO:0031966 GO:0042405 GO:0008242 GO:0031625 GO:0004843 GO:0034605 GO:0071218 GO:0035640 GO:0006515 GO:0035520 GO:0043161 GO:0006355 GO:0006351 | |
InterPro | IPR006155 IPR003903 | |
Pfam | PF02099 PF02809 | |
PRINTS | PR01233 | |
SMART | SM00726 | |
PROSITE | PS50957 PS50330 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0071218 |
cellular response to misfolded protein |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035520 |
monoubiquitinated protein deubiquitination |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006515 |
protein quality control for misfolded or incompletely synthesized proteins |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016579 |
protein deubiquitination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000366325 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1099442 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1099442 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004843 |
thiol-dependent ubiquitin-specific protease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016579 |
protein deubiquitination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0036459 |
thiol-dependent ubiquitinyl hydrolase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008234 |
cysteine-type peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
p