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CANFA:RAB7A

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Species (Taxon ID) Canis familiaris (Dog) (Canis lupus familiaris). (9615)
Gene Name(s) RAB7A (synonyms: RAB7)
Protein Name(s) Ras-related protein Rab-7a
External Links
UniProt P18067
EMBL M35522
PIR B30413
RefSeq NP_001003316.1
XP_005632072.1
UniGene Cfa.29293
ProteinModelPortal P18067
SMR P18067
IntAct P18067
MINT MINT-8387239
STRING 9615.ENSCAFP00000034211
BindingDB P18067
PaxDb P18067
PRIDE P18067
Ensembl ENSCAFT00000038482
GeneID 404007
KEGG cfa:404007
CTD 7879
eggNOG COG1100
GeneTree ENSGT00760000119125
HOGENOM HOG000233968
HOVERGEN HBG009351
InParanoid P18067
KO K07897
OMA DYPDPIK
OrthoDB EOG7G4QG8
TreeFam TF105605
Reactome REACT_221251
NextBio 20817494
Proteomes UP000002254
GO GO:0070062
GO:0005794
GO:0005770
GO:0005764
GO:0042470
GO:0045335
GO:0030670
GO:0019003
GO:0005525
GO:0045022
GO:0008333
GO:0007174
GO:0090383
GO:0090385
GO:0006622
GO:0007264
Gene3D 3.40.50.300
InterPro IPR027417
IPR005225
IPR001806
IPR003579
Pfam PF00071
PRINTS PR00449
SMART SM00175
SUPFAM SSF52540
TIGRFAMs TIGR00231
PROSITE PS51419

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0005525

GTP binding

PMID:18272684[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Figure1A:

GTP overlay tested by SDS-page analysis showed that the Rab7 wild type isoform and the active mutant isoforms of the protein where able to bind to the radioactive GTP while the dominant negative mutant, Rab7T22N, (which had a reduced affinity to GTP) didn’t bind since no band was seen in the gel.

Figure 1B: Western Blot analysis made with a monoclonal anti-Myc antibody showed the expression of the Myc-tagged Rab7 wild type protein as well.All this indicates that the Rab7 protein binds to GTP.

complete

GO:0005097

Rab GTPase activator activity

PMID:18272684[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Figure 2 A:

Mutated protein isoforms showed slower GTPase hydrolysis than the Rab7 wild type.

complete

GO:0002057

guanine binding

PMID:18272684[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Figure 2 B&C: The figures demonstrating the measurement of the GTPase activity of the His-tagged proteins show that the wild type Rab7 protein had a high affinity for guanine nucleotides specifically when GDP was added compared to the mutated Rab7 proteins associated with Charcot Marie Tooth Disease Type 2B

complete

GO:0005515

protein binding

PMID:18272684[1]

ECO:0000021

physical interaction evidence

UniProtKB:Q96NA2


F

Figure. 4 : Using two hybrid assays ;the wild type of Rab7 and the CMT2B-associated Rab7 mutants were interacting strongly with RILP .Also Rab7 Q67L (which is an active mutated Rab7 protein impaired in GTP hydrolysis not GTP binding ) showed a strong interaction with RILP compared to the interaction of the dominant-negative mutant Rab7 T22N which was extremely weak .

complete

GO:0005770

late endosome

PMID:18272684[1]

ECO:0000314

direct assay evidence used in manual assertion

C

(Figure. 6M–X): When co-expressed with RILP,the Rab7 wild type, Rab7 Q67L and the CMT2B-associated Rab7 mutant proteins were present on the clustered endosomal structures. Which indicates that Rab7 not only interacts with RILP but it also colocalizes with RILP.

complete

part_of

GO:0070382

exocytic vesicle

PMID:18504258[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0098993

anchored component of synaptic vesicle membrane

PMID:20926670[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032419

extrinsic component of lysosome membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51150

C

Seeded From UniProt

complete

part_of

GO:0031902

late endosome membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51150

C

Seeded From UniProt

complete

part_of

GO:0005811

lipid droplet

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51150

C

Seeded From UniProt

complete

involved_in

GO:0061724

lipophagy

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51150

P

Seeded From UniProt

complete

involved_in

GO:0090385

phagosome-lysosome fusion

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51149

P

Seeded From UniProt

complete

involved_in

GO:0090383

phagosome acidification

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51149

P

Seeded From UniProt

complete

part_of

GO:0045335

phagocytic vesicle

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51149

C

Seeded From UniProt

complete

involved_in

GO:0045022

early endosome to late endosome transport

PMID:8522602[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007174

epidermal growth factor catabolic process

PMID:16282324[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005770

late endosome

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P51149

C

Seeded From UniProt

complete

part_of

GO:0045335

phagocytic vesicle

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2442295
PANTHER:PTN000635769
UniProtKB:P51149
UniProtKB:Q96AH8
WB:WBGene00004271

C

Seeded From UniProt

complete

involved_in

GO:0032482

Rab protein signal transduction

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015790
PANTHER:PTN001292747
RGD:3529
dictyBase:DDB_G0269238

P

Seeded From UniProt

complete

involved_in

GO:0008333

endosome to lysosome transport

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015795
PANTHER:PTN001178536
UniProtKB:P51149

P

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1914292
PANTHER:PTN001292747
TAIR:locus:2094029
TAIR:locus:2123010
UniProtKB:Q9BW83

P

Seeded From UniProt

complete

part_of

GO:0005774

vacuolar membrane

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000635769
UniProtKB:C8VQY7

C

Seeded From UniProt

complete

part_of

GO:0005770

late endosome

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015795
MGI:MGI:2442295
PANTHER:PTN000635769
UniProtKB:Q96AH8
WB:WBGene00004271

C

Seeded From UniProt

complete

part_of

GO:0005770

late endosome

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015795
MGI:MGI:105068
MGI:MGI:2442295
PANTHER:PTN000635769
RGD:61908
UniProtKB:P51149
UniProtKB:Q96AH8
WB:WBGene00004271

C

Seeded From UniProt

complete

part_of

GO:0005764

lysosome

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2442295
PANTHER:PTN000635769
UniProtKB:Q96AH8
WB:WBGene00004271
dictyBase:DDB_G0269236

C

Seeded From UniProt

complete

part_of

GO:0005764

lysosome

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2442295
PANTHER:PTN000635769
UniProtKB:P51149
UniProtKB:Q96AH8
WB:WBGene00004271
dictyBase:DDB_G0269236

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015790
FB:FBgn0015797
FB:FBgn0016700
MGI:MGI:104606
MGI:MGI:105072
MGI:MGI:105926
MGI:MGI:1861441
MGI:MGI:1931295
MGI:MGI:2443036
MGI:MGI:99425
PANTHER:PTN001292747
PomBase:SPAC1565.06c
PomBase:SPAC4C5.02c
PomBase:SPBC1703.10
RGD:3529
RGD:619762
SGD:S000000833
SGD:S000001722
SGD:S000001856
SGD:S000001889
SGD:S000003178
SGD:S000004252
SGD:S000004460
SGD:S000004529
SGD:S000005037
SGD:S000005615
TAIR:locus:2041036
TAIR:locus:2082672
TAIR:locus:2202280
TAIR:locus:505006713
UniProtKB:P20336
UniProtKB:P20337
UniProtKB:P20338
UniProtKB:P20339
UniProtKB:P20340
UniProtKB:P51148
UniProtKB:P51149
UniProtKB:P51151
UniProtKB:P61006
UniProtKB:P61019
UniProtKB:P61020
UniProtKB:P61106
UniProtKB:P62491
UniProtKB:P62820
UniProtKB:Q13637
UniProtKB:Q14088
UniProtKB:Q15286
UniProtKB:Q15907
UniProtKB:Q86YS6
UniProtKB:Q96E17
UniProtKB:Q9H082
UniProtKB:Q9H0N0
UniProtKB:Q9H0T7
UniProtKB:Q9UL25
UniProtKB:Q9UL26
UniProtKB:Q9ULC3
WB:WBGene00004268
WB:WBGene00004271
WB:WBGene00006833

F

Seeded From UniProt

complete

involved_in

GO:0090385

phagosome-lysosome fusion

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000635769
UniProtKB:P51149

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0045022

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0045022

C

Seeded From UniProt

complete

involved_in

GO:0000045

autophagosome assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0061724

lipophagy

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

P

Seeded From UniProt

complete

part_of

GO:0034045

phagophore assembly site membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0032419

extrinsic component of lysosome membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0031902

late endosome membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0005811

lipid droplet

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0005770

late endosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0005768

endosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51150
ensembl:ENSMUSP00000109230

C

Seeded From UniProt

complete

enables

GO:1905394

retromer complex binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

F

Seeded From UniProt

complete

involved_in

GO:1903543

positive regulation of exosomal secretion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:1903542

negative regulation of exosomal secretion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0090385

phagosome-lysosome fusion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0090383

phagosome acidification

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0048524

positive regulation of viral process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0045732

positive regulation of protein catabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

part_of

GO:0045335

phagocytic vesicle

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

involved_in

GO:0045022

early endosome to late endosome transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0042147

retrograde transport, endosome to Golgi

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

part_of

GO:0030904

retromer complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

involved_in

GO:0022615

protein to membrane docking

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0019076

viral release from host cell

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

enables

GO:0019003

GDP binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

F

Seeded From UniProt

complete

part_of

GO:0010008

endosome membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

involved_in

GO:0008333

endosome to lysosome transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0007174

epidermal growth factor catabolic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

involved_in

GO:0006622

protein targeting to lysosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

P

Seeded From UniProt

complete

part_of

GO:0005770

late endosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

part_of

GO:0005764

lysosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

F

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P51149
ensembl:ENSP00000265062

F

Seeded From UniProt

complete

part_of

GO:0005764

lysosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:A0A158RFU6
ensembl:ENSP00000265062

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001806

F

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001806
InterPro:IPR005225

F

Seeded From UniProt

complete

involved_in

GO:0016042

lipid catabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0442

P

Seeded From UniProt

complete

part_of

GO:0005768

endosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0967

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653

P

Seeded From UniProt

complete

involved_in

GO:0006629

lipid metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0443

P

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0342

F

Seeded From UniProt

complete

part_of

GO:0031410

cytoplasmic vesicle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0968

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0005811

lipid droplet

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0551
UniProtKB-SubCell:SL-0154

C

Seeded From UniProt

complete

involved_in

GO:0006914

autophagy

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0072

P

Seeded From UniProt

complete

part_of

GO:0005764

lysosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0458

C

Seeded From UniProt

complete

part_of

GO:0005765

lysosomal membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0157

C

Seeded From UniProt

complete

part_of

GO:0031902

late endosome membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0151

C

Seeded From UniProt

complete

part_of

GO:0010008

endosome membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0100

C

Seeded From UniProt

complete

part_of

GO:0000421

autophagosome membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0022

C

Seeded From UniProt

complete

part_of

GO:0033162

melanosome membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0160

C

Seeded From UniProt

complete

part_of

GO:0030670

phagocytic vesicle membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0205

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Spinosa, MR et al. (2008) Functional characterization of Rab7 mutant proteins associated with Charcot-Marie-Tooth type 2B disease. J. Neurosci. 28 1640-8 PubMed GONUTS page
  2. Cao, Z et al. (2008) Use of fluorescence-activated vesicle sorting for isolation of Naked2-associated, basolaterally targeted exocytic vesicles for proteomics analysis. Mol. Cell Proteomics 7 1651-67 PubMed GONUTS page
  3. Pavlos, NJ et al. (2010) Quantitative analysis of synaptic vesicle Rabs uncovers distinct yet overlapping roles for Rab3a and Rab27b in Ca2+-triggered exocytosis. J. Neurosci. 30 13441-53 PubMed GONUTS page
  4. Feng, Y et al. (1995) Rab 7: an important regulator of late endocytic membrane traffic. J. Cell Biol. 131 1435-52 PubMed GONUTS page
  5. Ceresa, BP & Bahr, SJ (2006) rab7 activity affects epidermal growth factor:epidermal growth factor receptor degradation by regulating endocytic trafficking from the late endosome. J. Biol. Chem. 281 1099-106 PubMed GONUTS page
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