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CAEEL:ERGO1
Contents
| Species (Taxon ID) | Caenorhabditis elegans. (6239) | |
| Gene Name(s) | ergo-1 (ECO:0000312 with WormBase:R09A1.1a) | |
| Protein Name(s) | Piwi-like protein ergo-1 (ECO:0000255 with RuleBase:RU361178)
Endogenous RNA interference deficient argonaute protein 1 (ECO:0000312 with WormBase:R09A1.1a) | |
| External Links | ||
| UniProt | O61931 | |
| EMBL | BX284605 | |
| PIR | T33275 | |
| RefSeq | NP_503362.2 | |
| UniGene | Cel.17334 | |
| ProteinModelPortal | O61931 | |
| SMR | O61931 | |
| STRING | 6239.R09A1.1 | |
| EPD | O61931 | |
| PaxDb | O61931 | |
| PRIDE | O61931 | |
| EnsemblMetazoa | [example_ID R09A1.1a] | |
| GeneID | 178602 | |
| KEGG | cel:CELE_R09A1.1 | |
| UCSC | R09A1.1 | |
| CTD | 178602 | |
| WormBase | R09A1.1a | |
| eggNOG | KOG1041 ENOG410XP07 | |
| HOGENOM | HOG000016239 | |
| InParanoid | O61931 | |
| KO | K11593 | |
| OMA | DYRGNDR | |
| PhylomeDB | O61931 | |
| PRO | PR:O61931 | |
| Proteomes | UP000001940 | |
| ExpressionAtlas | O61931 | |
| GO | GO:0005737 GO:0017151 GO:0003676 GO:0030422 GO:0006417 GO:0016246 | |
| Gene3D | 3.30.420.10 | |
| InterPro | IPR003100 IPR003165 IPR012337 | |
| Pfam | PF02170 PF02171 | |
| SMART | SM00949 SM00950 | |
| SUPFAM | SSF101690 SSF53098 | |
| PROSITE | PS50821 PS50822 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0030422 |
production of siRNA involved in RNA interference |
ECO:0000315 |
P |
Figure 3B |
complete | |||||
|
involved_in |
GO:0090065 |
regulation of production of siRNA involved in RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0035197 |
siRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030422 |
production of siRNA involved in RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016246 |
RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0017151 |
DEAD/H-box RNA helicase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031047 |
gene silencing by RNA |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gent, JI et al. (2010) Distinct phases of siRNA synthesis in an endogenous RNAi pathway in C. elegans soma. Mol. Cell 37 679-89 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Billi, AC et al. (2012) The Caenorhabditis elegans HEN1 ortholog, HENN-1, methylates and stabilizes select subclasses of germline small RNAs. PLoS Genet. 8 e1002617 PubMed GONUTS page
- ↑ Yigit, E et al. (2006) Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127 747-57 PubMed GONUTS page
- ↑ Shirayama, M et al. (2014) The Vasa Homolog RDE-12 engages target mRNA and multiple argonaute proteins to promote RNAi in C. elegans. Curr. Biol. 24 845-51 PubMed GONUTS page
