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CAEEL:D0VWM8

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Species (Taxon ID) Caenorhabditis elegans. (6239)
Gene Name(s) No Information Provided.
Protein Name(s) Protein TDP-1, isoform c (ECO:0000313 with EMBL:CBH29662.1)
External Links
UniProt D0VWM8
EMBL Z49910
RefSeq NP_001254189.1
UniGene Cel.15106
ProteinModelPortal D0VWM8
SMR D0VWM8
PaxDb D0VWM8
EnsemblMetazoa F44G4.4c
GeneID 174436
KEGG cel:CELE_F44G4.4
CTD 174436
WormBase F44G4.4c
eggNOG NOG145464
GeneTree ENSGT00730000110584
HOGENOM HOG000016692
InParanoid D0VWM8
OMA KHNSSRQ
PRO PR:D0VWM8
Proteomes UP000001940
ExpressionAtlas D0VWM8
GO GO:0005634
GO:0000166
GO:0003727
Gene3D 3.30.70.330
InterPro IPR012677
IPR000504
Pfam PF00076
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012677

F

Seeded From UniProt

complete

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000504

F

Seeded From UniProt

complete

GO:0003727

single-stranded RNA binding

PMID:15826655[1]

IDA: Inferred from Direct Assay

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:21611156[2]

IDA: Inferred from Direct Assay

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0006351

transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0804

P

Seeded From UniProt

complete

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0805

P

Seeded From UniProt

complete

GO:0006397

mRNA processing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

GO:0008380

RNA splicing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Ayala, YM et al. (2005) Human, Drosophila, and C.elegans TDP43: nucleic acid binding properties and splicing regulatory function. J. Mol. Biol. 348 575-88 PubMed GONUTS page
  2. Meissner, B et al. (2011) Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. PLoS ONE 6 e19937 PubMed GONUTS page