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BPT7:ENDO
Contents
Species (Taxon ID) | Enterobacteria phage T7 (Bacteriophage T7). (10760) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Endonuclease I
Gene product 3 Gp3 Junction-resolving enzyme gp3 | |
External Links | ||
UniProt | P00641 | |
EMBL | V01127 V01146 | |
PIR | B94615 | |
RefSeq | NP_041972.1 | |
PDB | 1FZR 1M0D 1M0I 2PFJ 3CAE | |
PDBsum | 1FZR 1M0D 1M0I 2PFJ 3CAE | |
ProteinModelPortal | P00641 | |
SMR | P00641 | |
DIP | DIP-41668N | |
IntAct | P00641 | |
MINT | MINT-1513471 | |
GeneID | 1261079 | |
KEGG | vg:1261079 | |
EvolutionaryTrace | P00641 | |
Proteomes | UP000000840 | |
GO | GO:0008833 GO:0003677 GO:0015074 GO:0039657 | |
Gene3D | 3.40.91.30 | |
InterPro | IPR008029 IPR011335 IPR011578 | |
Pfam | PF05367 | |
SUPFAM | SSF52980 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:1990238 |
double-stranded DNA endodeoxyribonuclease activity |
ECO:0000315 |
F |
Figure 1 shows significant degradation of both double and single stranded DNA upon infection with T7. The researchers, therefore, mutated a number of genes, and found out that only the mutants in genes 1 or 3 did not induce an increased endonuclease activity. It is, furthermore, stated that the product of gene 1 (RNA polymerase factor) is needed for the transcription of most of the T7 genome. Mutants in gene 3 were still synthesizing all essential T7 proteins, only lacking the increased endonuclease activity. |
complete | |||||
GO:1990238 |
double-stranded DNA endodeoxyribonuclease activity |
ECO:0000315 |
F |
Figure 1 shows endonuclease activity after T7 infection of E. coli B. The endonuclease activity was not seen after infection with a mutant in gene 3 (Table 1). |
complete | |||||
GO:1990238 |
double-stranded DNA endodeoxyribonuclease activity |
ECO:0000314 |
F |
The enzyme was purified and tested against various sources DNA. Breaks in the DNA strands were found (3-4 breaks per single strand before double strand breakage (see Figure 3). |
complete | |||||
GO:0008821 |
crossover junction endodeoxyribonuclease activity |
ECO:0000314 |
F |
After binding to the DNA junction as a dimer, the two subunits of the T7 endonuclease 1 catalyze cleavages independently but rather simultaneously before either is released from the junction (within the lifetime of the protein-junction complex) (Figure 6 and text around it, and Discussion). Similar characteristics have been found in T4 endonuclease VII. |
complete | |||||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004519 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090305 |
nucleic acid phosphodiester bond hydrolysis |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004518 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004536 |
deoxyribonuclease activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008833 |
deoxyribonuclease IV (phage-T4-induced) activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015074 |
DNA integration |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016032 |
viral process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008833 |
deoxyribonuclease IV (phage-T4-induced) activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004518 |
nuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0039657 |
suppression by virus of host gene expression |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004519 |
endonuclease activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016032 |
viral process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099015 |
degradation of host chromosome by virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Center, MS et al. (1970) The structural gene for a T7 endonuclease essential for phage DNA synthesis. Proc. Natl. Acad. Sci. U.S.A. 65 242-8 PubMed GONUTS page
- ↑ 2.0 2.1 Sadowski, PD (1971) Bacteriophage T7 endonuclease. I. Properties of the enzyme purified from T7 phage-infected Escherichia coli B. J. Biol. Chem. 246 209-16 PubMed GONUTS page
- ↑ Parkinson, MJ & Lilley, DM (1997) The junction-resolving enzyme T7 endonuclease I: quaternary structure and interaction with DNA. J. Mol. Biol. 270 169-78 PubMed GONUTS page