GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BOVIN:CSPG2
Contents
Species (Taxon ID) | Bos taurus (Bovine). (9913) | |
Gene Name(s) | VCAN (synonyms: CSPG2) | |
Protein Name(s) | Versican core protein
Chondroitin sulfate proteoglycan core protein 2 Chondroitin sulfate proteoglycan 2 Glial hyaluronate-binding protein GHAP Large fibroblast proteoglycan PG-M | |
External Links | ||
UniProt | P81282 | |
EMBL | AF060456 AF060457 AF060458 AF060459 | |
PIR | T14274 T42389 | |
RefSeq | NP_851378.1 | |
UniGene | Bt.5395 | |
ProteinModelPortal | P81282 | |
SMR | P81282 | |
STRING | 9913.ENSBTAP00000019848 | |
PaxDb | P81282 | |
PRIDE | P81282 | |
GeneID | 282662 | |
KEGG | bta:282662 | |
CTD | 1462 | |
eggNOG | NOG12793 | |
HOGENOM | HOG000168523 | |
HOVERGEN | HBG051140 | |
InParanoid | P81282 | |
KO | K06793 | |
NextBio | 20806340 | |
Proteomes | UP000009136 | |
GO | GO:0005578 GO:0005509 GO:0030246 GO:0005540 GO:0007155 | |
Gene3D | 2.60.40.10 3.10.100.10 | |
InterPro | IPR001304 IPR016186 IPR018378 IPR016187 IPR000742 IPR001881 IPR013032 IPR000152 IPR018097 IPR007110 IPR013783 IPR003599 IPR013106 IPR000538 IPR000436 | |
Pfam | PF00008 PF00059 PF00084 PF07686 PF00193 | |
PRINTS | PR01265 | |
SMART | SM00032 SM00034 SM00181 SM00179 SM00409 SM00445 | |
SUPFAM | SSF56436 SSF57535 | |
PROSITE | PS00010 PS00615 PS50041 PS00022 PS01186 PS50026 PS01187 PS50835 PS01241 PS50963 PS50923 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0031012 |
extracellular matrix |
ECO:0000314 |
C |
Fig. 2 |
complete | |||||
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:102889 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007417 |
central nervous system development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001105676 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001501 |
skeletal system development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001105676 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005540 |
hyaluronic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005540 |
hyaluronic acid binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0030246 |
carbohydrate binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Evanko, SP et al. (2012) Hyaluronan and versican in the control of human T-lymphocyte adhesion and migration. Matrix Biol. 31 90-100 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page